Polyodon spathula (Mississippi paddlefish): 121320276
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Entry
121320276 CDS
T07273
Name
(RefSeq) Bardet-Biedl syndrome 10 protein homolog
KO
K19401
Bardet-Biedl syndrome 10 protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121320276
Cilium and associated proteins [BR:
pspa03037
]
Primary cilia and associated proteins
BBS-CCT complex
121320276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
121320276
NCBI-ProteinID:
XP_041114462
LinkDB
All DBs
Position
8:46602488..46606739
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AA seq
728 aa
AA seq
DB search
MNHVHSLDIDTLIQIAETLESIVCQCFGPNGGQVLFTKATGELLVTRDGKRVLNSLLLDH
PIARMIVDCVSAHCGVTGDGAKSFILLLSALLRGLQASVDKGTAGQSTCHNFLGRAKQRS
EEMKHVTDCLLTFQTQVLNQIIRQHLNQHVTSLFTGDQMTVTNDKIGSIMEAYFCGKIGN
VHCKFLSEMACDFFFKCTCDRGRGQTLNLICRHFLDLHTAVKGFPIGSSRVLEGLVLHRD
FTVYCQTDGQLKVLVVTEPIQPPLSDAGTTLLLRSNFQLQSSNIWIAKRVEEIMNFLQQN
QVKLLLSSVKQSDVVLYHAQLCGISVVQCIEADELSLFCYLAGIAPLSSPWDILHSRDTD
LANAVFCKPVLLGAHRYAHIGLMNRGDFSPHCVILCGPIPGLTEQCVSAFHGGLKMLQHA
FEPVDLCQGQGLCSRNSNNANANEAHQVLTHCSLKTIVQEDSIKDTINETSDRHDICCPT
TEEICASSNLVSDKEQRGVIREDPKANQSSLAADVNLDIRNAQTGILAGCKTTGDNLDEH
LKQRNINCVNKAREMGSVFGQHSCAFSSCAIQKESTAAKNTQRDIRGSALTQEHADVLIE
AGSVLPVGGSFEFLLHHYLRLYAQHSLQPEVKTTCSLVADAVLNIPRNIYNTKSTNRHFL
QVYTKVRNDIQSKGCISDGPGLLESVSCKYQLLVSVLQCARSLVTIDSLIGIDRKTQNTT
KGEKEDVE
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatgtgcattctttggatattgatactctgatacagattgctgaaactttggaa
tccattgtttgtcaatgttttggaccgaatgggggccaagtactttttactaaagccaca
ggtgaattacttgttacacgagatggaaagagggtactgaattcacttcttctggaccat
cccattgccagaatgatcgtggattgtgtctctgctcactgcggtgtgactggagatggt
gccaagtcattcattttactgctgtctgcattgcttcgaggacttcaagcctcggtagac
aagggcacagcaggacaatccacctgtcacaactttttagggagagcaaaacagcgaagt
gaagagatgaagcatgtgaccgactgtctgcttacatttcagacacaggttttgaatcaa
attatcaggcagcaccttaatcagcacgtcacatctttgtttacaggtgatcagatgact
gtgacaaatgacaaaatagggtcaattatggaggcctatttttgtggcaaaataggaaat
gttcattgcaagtttttaagtgagatggcctgtgatttcttttttaagtgcacctgtgat
cggggaagaggtcagactctgaatttaatttgcagacattttttagaccttcacactgca
gtgaagggttttcctatagggagttcaagggtcctggaagggctggtgctgcaccgagat
ttcacagtttactgccagacagatggtcagttaaaagtgttggttgtcacagaaccaatc
cagcctcctctttcagatgctggaacaacattgctcctccgttccaactttcaattgcag
tcttccaacatctggattgctaaaagagtggaggaaataatgaactttttacaacagaac
caagtgaaattattattatccagtgtaaagcagtctgatgtggtcctctatcatgcacag
ttgtgtggtatatctgttgtgcaatgtatagaggctgatgagttatctctcttctgttat
cttgctggaatagctcctctttcatcaccttgggacattcttcacagtagagacacagac
ctggcaaacgcagtgttttgcaaacctgttttgcttggagcccataggtatgctcacatt
ggtttgatgaatagaggtgatttttccccacattgtgttatcctttgcgggcccattcct
ggtctaaccgagcagtgtgtctctgcctttcacggtggtttgaaaatgctgcagcatgca
tttgagcctgttgatttatgccaagggcaggggttgtgcagcagaaattcaaacaatgct
aatgcaaacgaagcccatcaagtattgacccactgcagcttgaaaacaattgttcaggaa
gatagtattaaagatacaattaatgaaaccagtgacagacatgacatttgctgccctaca
actgaggaaatttgtgccagcagcaatttggtcagtgataaagagcagaggggtgttata
agggaggacccaaaggcaaatcaaagcagccttgctgctgatgtgaacttggacatcagg
aatgcacagactggtattttagcaggatgcaagaccacaggtgataatttggatgaacat
ttaaagcaaaggaacattaattgtgtgaacaaagcaagagaaatgggcagtgtatttgga
caacatagttgtgctttcagtagctgtgccattcaaaaagagagtactgcagctaaaaat
acgcaaagggatatccgaggcagtgccctcacacaggagcatgcagatgtcctaatagaa
gctggcagtgttttgccagtaggaggcagctttgaatttctcttacaccactatctccgg
ctgtacgcccagcacagcctgcagcctgaagtgaagacaacgtgcagccttgtagcagac
gctgtgctaaacattcccaggaacatttacaataccaaaagcacaaacagacattttcta
caagtttataccaaagtcagaaatgacattcaaagcaagggatgtataagtgatggccct
gggttactagagtcggtgtcttgtaaataccagcttctggtttcagtactgcagtgtgca
aggagtctggtgactatagactctttgattggtattgacagaaagactcaaaacacaaca
aagggggaaaaagaagatgttgagtga
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