Polyodon spathula (Mississippi paddlefish): 121320460
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Entry
121320460 CDS
T07273
Name
(RefSeq) radixin
KO
K05762
radixin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04517
IgSF CAM signaling
pspa04530
Tight junction
pspa04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121320460
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121320460
09142 Cell motility
04810 Regulation of actin cytoskeleton
121320460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121320460
04147 Exosome [BR:
pspa04147
]
121320460
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Ezrin/Radixin/Moesin
121320460
Exosome [BR:
pspa04147
]
Exosomal proteins
Proteins found in most exosomes
121320460
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ERM_C
FERM_M
ERM_helical
FERM_C
FERM_N
Motif
Other DBs
NCBI-GeneID:
121320460
NCBI-ProteinID:
XP_041114729
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All DBs
Position
9:complement(18149541..18256193)
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AA seq
582 aa
AA seq
DB search
MPKPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYTTWLK
LNKKVTQQDVRKENPLQFKFRAKFFPEDVSEELIQEITQRLFFLQVKEAILNDENYCPPE
TAVLLASYAVQAKYGDFNKEVHKPGYLTNDRLLPQRVLEQHKLTKEQWEERIQTWHEEHR
GILREDSVMEYLKIAQDLEMYGVNYFEIKNKKGTELWLGVDALGLNIYEHEDKLTPKIGF
PWSEIRNISFNDKKFVIKPIDKKAPDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTI
EVQQMKAQAREEKHQKQIERAQLENEKKKRQLAEQEKERIEREKDELIERLKQIEEQTFK
AQKELEEQTRRALELDQEKKRAKEEAERLERERQSAEEARLALAKQAADQMKNQEQLAAE
LGEFTAKIALLEEAKRKKEEEASEWQHKALLAQDDLERTKEELKIVMSVPPPPPPPMVAP
LENEHDEQDENSAEASAELSNEGVSNHRSEEERLTETQKNKRVKKQLQALSSELAQARDD
TKKTQNDVLHAENVKAGRDKYKTLRQIRQGNTKQRIDEFESM
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaccgatcaatgtgcgggtcactactatggatgcagagctggagtttgccatc
cagcccaatacaactggcaagcagttatttgaccaggtggtaaagacagttggacttcgt
gaagtctggttctttgggctacagtatgtggacagcaaaggttacacaacatggttgaaa
ctgaacaaaaaggtaacacagcaagacgtcagaaaagagaatcccttacagttcaagttc
cgggcaaaattcttccctgaggatgtgtcggaggagctgatccaggagatcacacagagg
ctgttcttcctgcaggtgaaggaggccatcctgaatgatgaaaactactgcccgcctgag
accgccgtcctgctggcttcttacgctgtgcaggccaagtacggtgatttcaacaaagag
gtccacaagccaggctatctaaccaacgacaggctccttcctcagcgggttttggaacaa
cataaactaaccaaagaacagtgggaagaaagaattcagacctggcatgaggaacacaga
ggaattctaagagaagattcagtgatggagtacctgaagattgcacaggatctggagatg
tacggtgtgaactactttgaaattaagaacaaaaagggaacagaactgtggctgggtgtt
gacgcgctggggcttaacatttacgaacatgaggacaagttgacaccgaagattggcttc
ccttggagtgaaattagaaacatttcatttaatgacaagaagtttgttatcaagcccatt
gacaaaaaagctccagactttgtgttctacgcccctcggctgagaataaacaaacgtatc
ctggcgttgtgcatgggcaaccacgagctgtacatgaggaggaggaagccagacacaatc
gaagtgcagcagatgaaggctcaggccagggaggagaagcaccagaagcagattgagaga
gcacagctagaaaatgagaagaagaaaagacagttggcagaacaagaaaaggaaagaata
gagcgggagaaggatgagctgattgagcgactcaaacaaattgaagaacagacattcaag
gcacaaaaagagctggaggagcagacccggcgtgccctggaactggaccaggagaagaag
cgagcaaaggaggaggcagagcggctggagagggagcgccagagtgctgaggaggcccgg
ttagcactggcaaagcaggctgcggaccagatgaagaaccaggagcaactagctgctgaa
ctcggtgaatttactgctaaaatcgccctgctcgaggaagccaagaggaaaaaggaggag
gaggcatccgaatggcagcacaaagcgcttttggcacaggacgacctggagaggaccaag
gaggagctgaagattgtgatgagcgtgccaccgcctcctcccccacccatggtggcccct
ctggagaacgagcacgacgagcaggatgagaacagcgcagaggccagcgcggaactctcc
aacgagggcgtcagcaaccaccgcagcgaggaggagcgcctcactgagacccagaaaaac
aagcgagttaagaagcagctgcaggctttgagctctgagctggcccaggctcgggacgac
accaagaaaactcagaacgatgtcctccatgcagagaatgtgaaggcaggccgtgacaag
tacaagaccctgcggcagatccggcaaggaaacacaaagcagcggattgacgagtttgag
tccatgtga
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