Polyodon spathula (Mississippi paddlefish): 121320752
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Entry
121320752 CDS
T07273
Symbol
nr1i2
Name
(RefSeq) nuclear receptor subfamily 1 group I member 2
KO
K08540
pregnane X receptor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121320752 (nr1i2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pspa03310
]
121320752 (nr1i2)
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121320752 (nr1i2)
Nuclear receptors [BR:
pspa03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
121320752 (nr1i2)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121320752
NCBI-ProteinID:
XP_041115284
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Position
9:36264417..36288890
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AA seq
431 aa
AA seq
DB search
MSDQGSEGEAGFAPMMGKELEEEELEGRQSCDGGMVEDSDFDDDEEPKLCGVCGDNATGY
HFNAMTCEGCKGFFRRAMKRNLQFSCPFQNLCIITKNNRRQCQACRLKKCLDIGMLKELI
MSDKAVEQRRELIKKKKQRLKESPSTEEPKGLDTQQEAIIQELVEAQKKTFDISFSHFKQ
FRPINRNTDHQLQVNQTSPDQDASLQESQGASSRQWSDMEPHPSDSANKASSQIYSMLPH
IADLSTYMIQQIINFAKILSSFRELSIEDQIALLKGATFEVCQIRFNMLFNTESGIWECG
PILYNIDDAANAGFQPHLLDPLLKFHYMLRNLKLHETEYVLMQAISLFSPDRPGVVSHDA
IDKCQECFALILKTYIDTRRSQPSKLLFPKIMACLTELRTMNDEYTKQVLKIQDIQPDVT
PLMMEVFSNNP
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccagggcagcgagggtgaggctggctttgccccaatgatgggcaaggagcta
gaagaggaggagctggaggggaggcagagctgcgatggaggaatggtcgaggacagtgat
tttgacgacgacgaagagcccaaattgtgtggggtttgcggggacaatgccactggttac
cacttcaacgccatgacttgtgaaggctgcaagggcttcttcaggcgtgccatgaagcgc
aatcttcagttcagctgcccatttcagaacttgtgcatcatcaccaaaaacaaccggaga
cagtgtcaagcatgccgtttgaaaaagtgcctggatattggcatgcttaaagaattgatc
atgtcagacaaagcagttgaacagagacgggagctaattaagaaaaagaagcagaggctt
aaggagtcgccctctacagaagagccgaagggcctggacacacaacaggaagcgatcatc
caggagcttgtggaggctcagaagaagaccttcgacatctccttctcacacttcaagcag
ttcaggcctatcaatcggaacaccgaccaccagctgcaagtcaaccagacttctccagat
caagacgccagtctgcaggagagtcagggagccagcagcaggcagtggtcagacatggaa
ccccatcccagcgattcagcaaacaaggccagctcccagatttactccatgttgccccac
attgctgatttgtccacctacatgattcagcagatcatcaactttgccaagattctgtcc
agcttcagggaactctcaattgaagaccagatcgcactgctaaagggggcaacatttgag
gtgtgtcagatccgcttcaacatgctttttaacacagaatcagggatctgggaatgcggg
ccaatcctgtacaacattgatgatgccgccaatgctgggtttcagccccacctgcttgac
cccttgctgaagtttcactacatgctgcggaatttaaaacttcatgaaacggaatatgtt
ctgatgcaggccatctctctgttctccccagatcgtccaggcgttgtaagtcatgatgcc
attgacaagtgtcaagaatgttttgctttgatattaaaaacatacatcgacaccaggaga
tcccagccatctaagctcttgttccctaagatcatggcttgcctgacagagctgcgcacg
atgaacgacgagtacaccaaacaggtactgaagatccaggacatccagcccgacgtcacg
cccctcatgatggaggttttcagcaacaatccctag
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