Polyodon spathula (Mississippi paddlefish): 121321537
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Entry
121321537 CDS
T07273
Name
(RefSeq) early growth response protein 2b-like
KO
K12496
early growth response protein 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
121321537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121321537
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
121321537
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3446
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_STOP2_C
zf-C2HC_2
zf-BED
zf-C2H2_15
C2CH-3rd_BIRD-IDD
zf-C2H2_ZNF462_1st
DUF7565
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
121321537
NCBI-ProteinID:
XP_041116464
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Position
10:complement(16260893..16264304)
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AA seq
430 aa
AA seq
DB search
MTAKTVEKTPITLGGFVNQLPESIYTVDDIATTLPASVAIFPNADLVGHFDHVSGVPGDG
MINVDMSTDRRSLDLSSYSSSFTQPSPRNQTFTYMGKFSIDSQYPGANWNSESVINIVSA
GILTQPPSSSSSPASSISPNPYSSTLSCTMAQNQPEMEHIYSPPPPYSGCGDVYQDPSSF
LSSSTCHISYPPPCYSSPKPSTDSAHMFNIIPDYSSLFQPQCQRDIHSVPDRKPFPCPLE
SMRVPPPLTPLNTIRNFTLGGPAIDGPRLPIAYSPQNLPLRPILRPRKYPNRPSKTPVHE
RPYPCPAEGCDRRFSRSDELTRHIRIHTGHKPFQCRICMRNFSRSDHLTTHIRTHTGEKP
FACDFCGRKFARSDERKRHTKIHLRQKERKSSSAASTISVVSNTDRHVSISTSSGNICAT
GNNMCPPRTI
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgacagccaaaactgtggaaaaaactccaataactcttggtggttttgtgaaccagtta
cctgaaagcatctacacagtagatgacatcgccacgactttgccagcatcggttgcaatc
tttcctaatgctgatttagtaggacatttcgaccacgttagcggagtgccaggagatggt
atgatcaacgttgacatgagcacagatagaagatctcttgacttgtcttcttactccagc
agtttcacgcagccttcacctcgcaatcagaccttcacctacatgggcaagttctcgatt
gattctcagtacccaggtgccaactggaactcagaaagcgtcattaacattgtgagcgcc
gggatcctgactcagccgccctcgtcatcttcatcaccagcctcctccatctctcctaac
ccctactccagcaccttgagctgcacgatggctcagaaccagcctgaaatggagcacatc
tattcgcctccccctccttactctggctgtggggacgtctaccaagacccatcgtccttt
ctgtcctcatctacctgccacatatcctaccccccgccatgttactcttcaccaaaaccg
tccacggacagcgctcacatgttcaacattatcccggactattccagcctgttccagcca
cagtgccaacgggatatccattctgtacctgaccgcaagccattcccctgcccactggag
tctatgagagtgccgccaccgctcactcccctcaacactattcggaattttacactgggg
ggcccagctattgatgggcccaggctacccattgcttacagcccccagaatttacctctg
agacccatcctgcgtccgaggaagtaccctaaccgcccgagcaagacccctgtgcacgaa
cgtccctacccgtgcccggcagagggatgcgacaggaggttctcccgttctgatgagctc
accaggcacatccgaattcacaccggtcacaaaccatttcagtgccggatctgtatgagg
aacttcagccgaagcgaccacctcaccacccatatccgtacccacacaggagagaaaccg
ttcgcctgcgatttctgcggcaggaaattcgcgaggagtgacgaaagaaagaggcacaca
aaaattcacctcaggcaaaaggaaagaaaatcttcctcggcagcgtcaacgatctcagta
gtttcaaacactgacagacatgtcagtattagcacatctagcggtaatatttgcgctaca
ggcaacaatatgtgtcctcctaggacaatataa
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