Polyodon spathula (Mississippi paddlefish): 121321946
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Entry
121321946 CDS
T07273
Name
(RefSeq) LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 4-like
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04081
Hormone signaling
pspa04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
121321946
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121321946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121321946
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
121321946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
RA
PDC10_C
Motif
Other DBs
NCBI-GeneID:
121321946
NCBI-ProteinID:
XP_041117269
LinkDB
All DBs
Position
10:complement(36515424..36560646)
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AA seq
996 aa
AA seq
DB search
MISPKMVAAHTSSHTSASAEWIVCLDKRPSARSGEDVDIIFARLKDVKAFEKFHPNLLQQ
ICLCGFYENLEKGITLYRQGDIGTSWYAVLSGSLDVKVSETANHQDAVTICTLGIGTAFG
ESILDNTPRHATIVTREYSELLRIEQKEFKTLWEKYRQYMTGLLAPPYGVMETGPSNDRM
PDKENMSNNSLCSVSKHSNKTPLIESKATPHPSKTITQVPSEKILRAGKILRNAILSRAP
HMIRDRKYHLKTYKQCCVGTELVDWMMQQSPCVHSRTQAVGMWQVLLEEGVLNHVDQEHN
FQDKYLFYRFLDDEQEDAPLPSEDEKKESDEEIQDTLLVLSQIGPDAHMRMILRKPPGQR
TVDDLEIIYEELLHIKALSHLSTTVKRELTGVLIFESHAKAGTVLFNQGEEGTSWYIILK
GSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLRDDNCHFLRVDKEDFNRILRD
VEANTVRLKEHEQDVLVLEKIPSVSQGCNHGGSATQYKYTVMSGTPEKILEHFLENMRLD
SILPESDSALDDFVLMHCVFMPNSQLCSLLMAHYHAQPSQGTEQEKMDYALNNKRRVIRL
VLQWVTVCGELLQEEEASMAFLENFYVSVSDDSRMIPALKEQLPELEKTVKQNSEEAKSS
QKKHKVLLRQFSIGDERLQKRQPIRSNDEILFKVYCVDHTYTTIRVAVAASVKEVIAAVA
DKLGTGEDLILVKLSSSGEKVVLKPNEISVFTTLSQNGRLFFCPRDQFDSLSPLPEQEGP
SAGSMGTFELMSSKDLAYQITIYDWEHFNCVHERELIYHTFGRPNFKKTTANLDLFLRRF
NELQLWVVTEIALCSQLGKRVQLLKKFIKIAAHCREYKNLNVVLKHRVYIXFTNLLILSS
QDPSRNHRAYRLTVAKLEPPIIPFMPLLIKDMTFTHEGNKTFIDNLVNFEKMRMIANTVR
IVRYCLASLSNQCRTYTYSNLCQSCQDLNALRIGVL
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgatctcgccgaagatggtagcggcgcacacctcttcccacacttctgcatctgcagaa
tggattgtttgccttgataagaggccatctgcacgctctggtgaagatgttgatatcata
tttgcccgcctaaaggatgtgaaggcttttgaaaagtttcatcccaatttactgcagcaa
atatgtctctgtggattttacgaaaacttggagaaaggaatcacattatatcgtcagggg
gacattggaaccagttggtatgctgtactgtcagggtcccttgatgttaaagtgtctgaa
actgctaaccaccaggatgctgttactatttgtacgttggggatcggaacagcgtttggc
gaatcaatccttgataacacgccccgtcacgccaccatcgttactagagagtacagtgag
cttctgcgcattgaacagaaggagttcaaaacactgtgggagaaatatcgacagtatatg
actggacttttggcacctccttatggtgttatggaaactggccccagcaatgacagaatg
cctgacaaggagaatatgagtaacaactccttatgctcagtctctaaacattcaaacaag
acacctctcattgaaagcaaagccacaccacatccttccaaaaccattacacaggtccct
tctgagaagatcctgagagctgggaagattttacggaatgcaattctatctcgagcacct
cacatgataagagataggaaataccatttgaagacatacaaacaatgctgtgttgggaca
gagctggttgactggatgatgcagcagagcccttgtgttcattcacgaacgcaggcagtc
ggcatgtggcaagtgctgctggaggaaggggttctcaaccatgtggaccaggagcacaat
ttccaggacaagtacttgttttaccgcttcctggatgacgagcaggaagatgcccctctt
cccagtgaagatgagaagaaggagagtgatgaggagatccaggacaccctgctggtgctc
tcgcagattggacctgatgcacacatgagaatgatcctcaggaagccaccaggccagagg
acagtagatgatttagaaataatatacgaagaactcctgcacattaaagccttatctcat
ctttctacaacagtaaagagagaattaacaggcgtgttgatctttgaatcccatgctaaa
gccgggacagtgttgtttaaccagggggaagaaggaacatcctggtatatcattttaaag
ggatcagtaaatgttgtgatttatggcaagggagttgtgtgcaccctacatgaaggggat
gattttggtaaattagctctggtgaatgatgctccgagagcagcttctattgtcttgcgg
gacgataactgtcactttctcagggtcgataaagaagactttaacaggattctaagggac
gttgaggccaacacagtccggctgaaagagcatgagcaggacgtcttggttctggagaag
atcccgagtgttagccaaggctgtaaccatggaggcagtgcgactcagtacaaatacact
gtgatgtcaggaactccagagaaaattttagagcactttctggaaaatatgcggcttgat
tccattttaccagagtcagactctgcactggatgattttgttctgatgcactgtgtcttc
atgccaaacagtcagctctgctcactgcttatggctcattaccatgcccaaccatctcaa
ggcacagaacaggagaaaatggactatgccctcaataacaagcgtagagtgatccgcctg
gtgctgcaatgggtaacagtgtgcggggagcttctacaggaggaagaagcctccatggca
ttcttggaaaacttctacgtgtctgtatcagatgattccagaatgattccagctctaaag
gaacagcttccagaacttgagaagactgtgaaacagaattcagaagaagcaaaatcctca
caaaagaagcacaaagttcttctgcgtcagtttagcataggtgatgaaaggcttcagaaa
cgacaaccaattaggagcaatgatgaaattctctttaaagtgtactgtgtagaccacact
tacactacaatccgcgtggcagtagcggcttctgtgaaagaagtgatcgctgcggtagcg
gataagctgggcacaggggaggacttgatcttagtcaagctgagttcttcaggagagaag
gttgtgctgaagcccaatgaaatttctgtgtttaccaccctcagtcagaatggacgactg
tttttctgcccaagagaccagtttgattcactgagtcccctaccagagcaggaaggtcct
tcagctggatcaatgggaacttttgagctgatgagttccaaagacctggcttaccaaata
actatatatgactgggagcacttcaactgtgtgcatgagcgtgagctgatatatcacacg
tttggaagacctaatttcaagaagaccacagctaatctggacctgttcttgagacggttt
aacgagctgcagctgtgggtggtgacggagattgctctgtgttcccagcttggcaagcga
gttcagctgcttaagaaatttataaagatagccgcacattgcagggagtataaaaatctg
aatgttgtgctgaaacatcgggtatacattntgtttaccaacttgctgatactctcttcc
caggacccatccagaaaccacagggcatacaggcttactgtggccaaactggagccgcca
atcatccccttcatgccccttcttataaaagacatgaccttcacccatgaaggcaacaag
acttttattgacaatcttgtaaattttgaaaaaatgcgtatgattgcaaacacagtgagg
atagtgagatactgcctagctagcctttctaatcagtgtagaacatatacttattccaat
ctgtgtcagagttgtcaagatttaaatgcattaagaattggagtcctataa
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