Polyodon spathula (Mississippi paddlefish): 121322037
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Entry
121322037 CDS
T07273
Name
(RefSeq) stromal cell-derived factor 1-like isoform X1
KO
K10031
C-X-C motif chemokine 12
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04060
Cytokine-cytokine receptor interaction
pspa04672
Intestinal immune network for IgA production
pspa04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121322037
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121322037
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
121322037
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pspa04052
]
121322037
00536 Glycosaminoglycan binding proteins [BR:
pspa00536
]
121322037
Cytokines and neuropeptides [BR:
pspa04052
]
Cytokines
Chemokines
121322037
Glycosaminoglycan binding proteins [BR:
pspa00536
]
Heparan sulfate / Heparin
Chemokines
121322037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
121322037
NCBI-ProteinID:
XP_041117414
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Position
10:complement(9935703..9942691)
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AA seq
97 aa
AA seq
DB search
MDVKAFAVLTLLMVTMCIHVSHAKPFSLGQRCWCRSPEKSVHKNNVKNLKFLNTPNCPLQ
IIATMRNDKQVCLDPETKWLQQYLKNAINKIKNSRGI
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaaagcgtttgcagtattaaccctgctgatggtgacaatgtgcatccatgta
tcacatgcaaagccattcagcctgggccagagatgctggtgcagatctcctgagaagagt
gtgcacaagaacaacgtcaagaatctcaagtttctgaacactcccaactgccccctgcag
atcattgcaacaatgagaaatgacaaacaagtatgtcttgaccctgaaactaaatggcta
cagcaatacttgaagaatgctatcaacaagattaaaaactcaagaggcatttga
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