Polyodon spathula (Mississippi paddlefish): 121322491
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Entry
121322491 CDS
T07273
Symbol
gli2a
Name
(RefSeq) zinc finger protein GLI2a isoform X1
KO
K16798
zinc finger protein GLI2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
121322491 (gli2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121322491 (gli2a)
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
121322491 (gli2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Nm-ACP
Motif
Other DBs
NCBI-GeneID:
121322491
NCBI-ProteinID:
XP_041118492
LinkDB
All DBs
Position
10:48263821..48355611
Genome browser
AA seq
1504 aa
AA seq
DB search
METSAQTASETKETKGSIIEGNGFTDTGKKSSASAIARAPHHIFPTFHAPIPIDMRHHEG
RYHYEPHSIHAMHGPPGLTGSPVISDISLIRLSPHPAAVGEHPFNAPHHYVSPHMENYLR
SVHGSPTLSMISAARGLSPAEVTHEHLKERGLFSLPPPPPGATPAEYYHQMAVMASHRSP
YGELLMQSGAAAAMAAHLPDYINPVDVSRYSSPRLTPRLSRKRALSISPLSDASIDLQTM
IRTSPNSLVAYINNSRSSSAASGSYGHLSAGGISPAFAFPHPINPMAYQQILNQQRGLSS
AFGHTPPLIQPSPSFVTRQHMTGISCLPTPAHNNSNSNSTSDSNQNASGESAVSSTMNPM
ITKRSKVKTEGEGVKPASPGTQDHLAGIVGLTEDFDKDECKQEPEVIYETNCHWEGCTKE
YDTQDQLVHHINNEHIHGEKKEFVCRWEECSREQKPFKAQYMLVVHVRRHTGEKPHKCTF
EGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCK
IPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKHRNEALHRPQPPRENGANEASAKQSGRDS
EDNSTTRGMEDCLQVKPIKTENSVMYQSSPGGQSSCSSEPSPLGSIINNDSGVEMHMNRG
GSLGDLAALDGPPIRDSTVSSGSSTVGLQLRKNIPATHRLEQLKKEKLKTVRDSCSWASP
VPQARNTKLPPIPAIGSLLESSSTGDPTAMLPKQRLNELPTSNVAMLNQLNERRDSTTST
ISSAYTGSRRSSGISPCYSSRRSSEASQCGGRLNNISSADSYDPISTDMSRRSSEASLSE
GIQSLLNLTPAQQYRLKAKYAAATGGAPPTPLPNMDRMGVRTGMSLFGDAYESAATPMHP
PTVPRRCSDTGHATSSMMLQDVPGNSNRRASDPVRRPAVDPLSLPRVQRFNSTNSMNPLP
RPMERRNLSLQNYIRSNGSLHRHVFCSRPPSITENVAMETMSGDLDSQAPEDDIMLPDDV
VQYIKSQNRGSVDQDNSSTGYGSQALGFQGNVNVPQQHQHQFYGQRRMAMVDANMNQPGQ
IMAPCQMSPGNQQQFHSPPIMNKNNMPVQWNEVSSGTVDVIPSQTKQPFARGNLAVVLQK
QNFGQYQNINASQQTMQMNQNNAHIAQQSFTQRNAGFSTQRMNYMQQRQQQINLNEPMSP
QREINQNNAMLSLSAASVNAGQLPSCSSIPGSSAPMMTSNSRGPAVQNYSSQPGVGQNHL
APPNHHEDYSPTQQNFNSPSQRTMMNSSFSHGMMQPSPPPGPGPSNRQREALSSVQQEQA
FIRSPQSIHSMSPSHTTSEASPKRPPNMAQSQAQQCANGSQESSLMFYSGQIHMYEHNGN
LDAGISCARQQQVPQQCSSDIKSPTMPSPGVNQVSSTVDSQGMEHAQIDFDAMMDDGDQS
SLMSGTLSPSILQNLSQSSSRLTTPRSSLTLPSMPAGITNMAIGDMSSMLTALAEESKFL
NLLS
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atggagacttcggctcaaaccgctagtgagacaaaggagaccaagggctcaattatagag
gggaacggcttcacggacactggcaagaaatcgtcagcttcagcgatagcacgagctcca
caccacatattcccaacattccatgctccaattccgattgacatgcgtcaccatgaggga
agatatcactacgaaccacactccatacacgctatgcacggccctcctggattaactggt
agccctgtcatctccgacatctccctcattcgactgtccccccaccctgccgccgtcggg
gagcaccccttcaacgctcctcaccactacgtcagcccccacatggagaactacctccgc
tccgtgcacggcagccccacactctccatgatctcagcagcccgaggcctgagcccagcg
gaggttacacatgaacacttaaaggagagagggcttttcagcctgccccctcccccccct
ggagctacccctgctgagtactaccaccaaatggcagtgatggccagccaccgcagccct
tacggggaactcctgatgcagagcggagcagcagcagcgatggctgcacacctcccggac
tacatcaaccccgtggatgtatctcggtactccagcccacggctgactccgaggctcagt
cgaaagcgagccctttccatctcgcccctctccgatgccagcattgacctccagaccatg
atccgcacctcgcccaactccctggtggcctatatcaacaactccaggagcagctctgca
gccagcggctcgtacgggcatctctctgccggaggaatcagccctgcatttgcttttccc
caccccatcaatcccatggcttaccagcagattctgaaccagcagagaggcttgagctcc
gcgttcgggcacaccccccctctcatccagccgtctccctcgtttgtaacgcggcagcac
atgacaggaatctcctgccttccaacccctgcacacaacaacagcaacagcaacagcact
tccgactcaaaccagaacgccagtggggagtcagcagtgagcagcaccatgaacccgatg
ataaccaagcgatccaaggtgaagacagagggtgagggagtgaaaccagcctccccaggc
actcaggaccatctggctggaattgtgggtctcacagaagatttcgataaggacgagtgt
aaacaggagccggaagttatatacgagacaaactgccactgggagggctgcaccaaggag
tatgatactcaggaccagcttgtgcatcacattaataacgagcacatccacggggagaag
aaggagtttgtgtgccgctgggaggagtgctcccgggagcagaagcccttcaaggcgcag
tacatgctggtggtgcatgtgaggagacacacaggggagaagccacacaagtgcacattc
gaaggctgttccaaagcttactcccgactggagaatttaaagactcacctgagatcccac
actggagagaagccgtatgtctgtgaacacgagggctgcaataaagccttctctaacgcc
tcggacagagccaagcaccagaacaggacccactccaatgagaaaccttatgtgtgtaag
atcccgggctgcacaaagaggtacacagaccccagctccctgaggaagcatgtaaagact
gtacacgggcctgaagctcatgtcacaaagaaacatagaaacgaagccctccaccggcct
cagccaccaagggagaacggagcaaacgaggccagcgccaaacagagtggcagggactcg
gaggacaacagcacaactagaggcatggaggactgcttacaagtcaaacccattaaaaca
gagaactctgtgatgtatcagtccagccctggtggtcagtcgtcatgcagcagtgagcca
tccccgcttggcagcatcatcaacaatgacagtggagtagagatgcacatgaaccgtgga
gggagtctgggagacctggctgcactggatggcccccccattcgggactccaccgtttcc
tctgggtcctccacagtcggccttcagctgcgcaaaaacattcccgccactcacagactt
gaacaactcaagaaggagaaactaaagacggtgagggattcttgttcctgggccagccca
gtgcctcaagccagaaacaccaagctgcctcccataccagcgatcggttctttactggag
agttcaagtactggagatcccactgctatgctacccaagcagagactgaatgagctgcct
accagtaacgtcgctatgctcaatcagctgaatgaacgcagagacagcaccacgagtacc
atcagttcagcctacaccggcagccggagatcttcaggcatctcgccctgctattccagc
cgccgatccagtgaggcctcccagtgcgggggtcgtctgaacaacatcagctcagcagac
tcatacgatccaatctccacagatatgtctcggcgatcgagtgaggcgagtctgagtgag
ggaatacaaagcctcctgaatctcacccctgcccagcaatacaggctaaaggctaaatat
gccgctgcaactgggggagctccacccactcctctacccaacatggaccgcatgggtgtc
cggacagggatgtctctgtttggggatgcatacgagtctgcagccactcccatgcatccc
cctactgtgccacgacgatgcagtgacactggccatgctacgtccagtatgatgctgcag
gatgtgccaggcaacagcaacagacgtgcaagtgaccctgtgcggaggccagctgttgat
cctctgtctctcccgagggttcaacgctttaacagtacaaacagcatgaacccgctcccc
cggccaatggagaggcgcaacctcagtctgcagaactacatccgctcaaatggcagcctg
caccggcatgttttctgctccaggccaccaagcatcactgagaacgttgctatggagacg
atgtcaggtgacttggacagtcaggctccagaggatgacatcatgcttccggatgacgta
gtgcagtacattaaatctcagaacagaggctctgtggatcaggacaacagctccacaggc
tacggcagccaggcgctgggcttccaaggaaacgtgaatgtgccgcagcagcatcagcat
cagttttacggccagcggagaatggccatggttgacgcaaacatgaatcagccagggcaa
ataatggcaccatgccaaatgagcccagggaaccagcaacagttccactctccacctatt
atgaataaaaataacatgcccgtccagtggaatgaagtcagctcaggtactgttgatgtc
ataccaagtcagacaaagcagccgtttgccagggggaacttagcggttgtgctgcagaag
caaaactttggtcagtatcagaatattaatgccagccaacaaaccatgcaaatgaatcaa
aataatgcacacatagcacagcagagtttcacacagaggaacgcaggcttcagtacccaa
aggatgaactacatgcagcaaaggcagcagcagattaatttaaatgaaccaatgagccca
cagcgggagattaatcagaacaacgcaatgctcagcctgagtgctgcgagtgtaaacgca
ggccagctgccatcatgcagcagtataccaggcagctctgcacccatgatgaccagtaac
agtagaggacccgcagtgcagaattacagctctcagcctggggtgggtcaaaaccacctc
gccccccctaatcatcatgaagattacagtcccacccagcagaatttcaacagtccctcc
caacgcaccatgatgaactcaagtttcagccacggcatgatgcaacctagtccacctcca
gggcccggcccatccaacaggcagcgcgaggctctgagctccgtgcagcaggaacaggct
tttataagaagtccacagtccatccacagcatgagtcccagccacaccacttcagaagcc
agccccaaaaggccgcctaacatggcccagtcgcaggcccagcagtgcgctaatggcagc
caggaaagcagcttgatgttttattcaggacagattcacatgtatgagcacaatggaaac
ctcgacgcagggatttcctgtgcaaggcagcagcaggtgccgcagcagtgttcctctgat
ataaagtctcccaccatgccttccccaggagtcaaccaggtttcaagcacagtcgactcc
cagggcatggagcacgctcagatagactttgatgccatgatggatgacggagatcagtcc
agcttgatgtcaggaaccctcagccccagtatcctccagaacctctcccagagctcctcc
cggctcacaactcctcgcagctctctgacgctgccttccatgcctgctgggataaccaac
atggctatcggagacatgagctccatgttgacagcgctggctgaggaaagcaaatttctt
aacctgttgtcttag
DBGET
integrated database retrieval system
