Polyodon spathula (Mississippi paddlefish): 121323269
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Entry
121323269 CDS
T07273
Name
(RefSeq) beta-1,4-galactosyltransferase 1-like
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00052
Galactose metabolism
pspa00510
N-Glycan biosynthesis
pspa00513
Various types of N-glycan biosynthesis
pspa00514
Other types of O-glycan biosynthesis
pspa00515
Mannose type O-glycan biosynthesis
pspa00533
Glycosaminoglycan biosynthesis - keratan sulfate
pspa00601
Glycosphingolipid biosynthesis - lacto and neolacto series
pspa01100
Metabolic pathways
Module
pspa_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
pspa_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
121323269
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
121323269
00513 Various types of N-glycan biosynthesis
121323269
00515 Mannose type O-glycan biosynthesis
121323269
00514 Other types of O-glycan biosynthesis
121323269
00533 Glycosaminoglycan biosynthesis - keratan sulfate
121323269
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
121323269
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pspa01003
]
121323269
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121323269
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121323269
Enzymes [BR:
pspa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
121323269
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
121323269
2.4.1.90 N-acetyllactosamine synthase
121323269
Glycosyltransferases [BR:
pspa01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
121323269
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
121323269
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of breast milk
121323269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
CoV_NSP2_C
Glyco_tranf_2_2
CHGN
DAAD
Motif
Other DBs
NCBI-GeneID:
121323269
NCBI-ProteinID:
XP_041120175
LinkDB
All DBs
Position
1:82556930..82577139
Genome browser
AA seq
365 aa
AA seq
DB search
MTNSSPATRNIPGRFLQKTCTVVVVFCGLHLSVTMLYYFNTFEIIKNSVFAANSQQAKNI
NVSTVYPTTMLQTVKESTAPFKRESVETKTKELEQCPETSPLLVGPLRIEFSEPVDLEEV
KKQNPALQGGGRFTPKDCKALQKVAVIIPFRQREEHLKYWLYYLHPILQRQQLDYGVYVV
HQNGDETFNRAKLLNVGYAEALKEYDYDCFVFSDVDLIPMDDRNIYKCFGQPRHLSVSMD
KFGFSLPYTQFFGGVSSLSKEQYVKINGFPNNYWGWGGEDDDIYNRIVSKGMGISRPDGI
IGKCRMIRHNRDVKNEPNPQRFDRIARTRETMNSDGINSLSYKVVEIKKNTLFTEIIVDI
GSPGR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgacaaattcatcgcctgccactcggaacatacctggccgttttctccagaagacttgc
acagtggttgtggttttctgcgggcttcatctctcagttactatgttgtattactttaat
acttttgaaatcattaaaaacagtgtgtttgccgcaaattcacaacaagcgaaaaatata
aacgtcagcactgtatatcccaccaccatgttgcaaacagtaaaggaaagtactgcacca
tttaaaagggaatcggtggaaaccaaaacaaaggaactggaacaatgtcccgaaacatcg
ccacttctagtgggcccacttaggattgagttttcagagccagttgacttggaggaagtc
aagaaacagaatccagcgctacaaggaggagggaggtttaccccaaaagattgtaaagct
cttcagaaagtggctgtcatcattcctttccgacaacgcgaggaacatctcaagtactgg
ctgtactatcttcaccccattctgcagcggcagcagcttgattatggcgtttatgtggta
catcagaatggagatgaaactttcaatcgtgctaagctactgaatgtgggatatgctgaa
gctttgaaagaatatgattatgattgctttgtgttcagtgatgtggacttgatcccaatg
gatgatcgcaacatctacaagtgttttggtcagccaagacatctctctgtatctatggat
aaatttggcttcagtctaccttatacacagttctttggaggtgtgtcttctttaagcaaa
gagcagtatgtaaagatcaatggcttccccaacaactactgggggtggggaggtgaagat
gatgatatttacaacagaattgtttctaaaggtatgggaatatctcgcccagacggtatt
attggaaaatgtcgaatgatccgtcataacagagatgtcaaaaatgagcctaatccacag
aggtttgacagaattgcacgcacaagggagacaatgaattcagatggcataaattcactg
tcttacaaggtggttgaaattaaaaagaatacattatttacagaaataattgtggacatt
ggcagtccaggaaggtaa
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