Polyodon spathula (Mississippi paddlefish): 121323570
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Entry
121323570 CDS
T07273
Symbol
scly
Name
(RefSeq) selenocysteine lyase
KO
K01763
selenocysteine lyase [EC:
4.4.1.16
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00450
Selenocompound metabolism
pspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
121323570 (scly)
Enzymes [BR:
pspa01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
121323570 (scly)
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GFIT
Motif
Pfam:
Aminotran_5
Beta_elim_lyase
Aminotran_3
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
121323570
NCBI-ProteinID:
XP_041120630
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All DBs
Position
11:42087582..42100848
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AA seq
427 aa
AA seq
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MQPFNGNEEEPFRRVYLDYNATTPVEPEVIEAITEALREAWGNPSSSYRPGQKAREIISQ
SRESIAKMVGGCSDDIIFMSGGTEANNFVFRNAVKYFWDTYRKAEITGKEEVPVEMGGAL
PHIITSNVEHDSISLVAEQLVKEGKAEVTFVPVSKVTARVEVEDVMSAIRPNTCLISIML
ANNETGVLMPIAEISQRVQALCEMRGAPRILLHTDAAQAIGKLQVDTQELGVDYLTIVGH
KFYAPRIGALYVKGPGVTTPVHPLFFGGGQERNFRPGTENTPMIAGLGKAAELVHRNLDR
YENDMRETCEYLEQRLEEVFGKEKLHFNSHFSGSKRLPNTCNVSFLGVHLQGRKVLSLCH
RLLASVGAACHSDQGDSPSPILLNCGIHPSVAANALRLSVGRGTTKADVDVVIEDLRAAV
QQLEGLG
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgcagccattcaatggaaatgaagaggagccgttcaggagggtatacctggattacaat
gccaccactcctgtggagccagaggtgatcgaggccatcactgaagccctgagggaggcc
tgggggaaccccagcagcagctaccgcccaggtcaaaaagcaagagagataattagccaa
tcaagagagagcattgcaaagatggtgggagggtgctctgatgacattattttcatgtct
ggaggaacagaggcaaacaattttgtcttccgcaatgcagtcaagtacttctgggataca
tacaggaaggcagagattactggaaaagaggaggtgcctgtagagatgggcggggccttg
ccccacatcatcacctcaaatgtggagcatgactccatcagtctggtggctgaacaactt
gtgaaagaggggaaagcggaagtcacatttgtgccggtttccaaggtgacggcgagagtg
gaagttgaggatgtgatgtcagccatcaggcccaacacctgcctcatttccataatgctg
gctaacaacgaaaccggagtgctcatgcccatagcagagatcagccagagagtgcaggct
ctgtgcgagatgaggggggctccgagaatcctcctgcacacggatgcggcgcaggccatc
ggaaagctgcaggtggacacgcaggagctgggggtggactacctcaccatcgtcgggcac
aagttttatgccccgcgaatcggagccctgtatgtgaaggggcccggtgtcaccacaccc
gtgcaccctcttttttttggaggtgggcaggagaggaacttcagaccagggacagagaac
acccctatgattgctggcctcggaaaggcagcagaactggtccacagaaatctggatcgc
tatgagaatgacatgcgtgagacctgtgaatatctggagcagcgtctggaggaggtgttt
gggaaagagaagctccatttcaacagccacttcagcggctccaagaggctccccaacacg
tgcaatgtgtccttcctgggagtacacttgcaagggcgcaaggttctgtctctctgtcac
aggctgctggccagtgttggagctgcgtgccactcagaccaaggggacagtccgtctcct
atcctgctgaactgtggcatccacccttccgtggctgccaatgccctgcgtctgagcgtg
gggagagggaccaccaaggctgacgtggatgtcgttattgaggacctgagagcggcagtc
cagcaactggaggggctcggctag
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