Polyodon spathula (Mississippi paddlefish): 121323684
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Entry
121323684 CDS
T07273
Name
(RefSeq) C-X-C chemokine receptor type 4-like
KO
K04189
C-X-C chemokine receptor type 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03250
Viral life cycle - HIV-1
pspa03260
Virion - Human immunodeficiency virus
pspa04020
Calcium signaling pathway
pspa04060
Cytokine-cytokine receptor interaction
pspa04144
Endocytosis
pspa04672
Intestinal immune network for IgA production
pspa04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121323684
03260 Virion - Human immunodeficiency virus
121323684
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121323684
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121323684
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121323684
09142 Cell motility
04810 Regulation of actin cytoskeleton
121323684
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
121323684
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pspa04030
]
121323684
04050 Cytokine receptors [BR:
pspa04050
]
121323684
04090 CD molecules [BR:
pspa04090
]
121323684
G protein-coupled receptors [BR:
pspa04030
]
Rhodopsin family
Chemokine
CXC Chemokine
121323684
Cytokine receptors [BR:
pspa04050
]
Chemokine receptors
CXC Chemokine
121323684
CD molecules [BR:
pspa04090
]
Proteins
121323684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
CXCR4_N
7TM_GPCR_Srsx
TIMELESS
Anoctamin
Motif
Other DBs
NCBI-GeneID:
121323684
NCBI-ProteinID:
XP_041120810
LinkDB
All DBs
Position
11:9223912..9226412
Genome browser
AA seq
359 aa
AA seq
DB search
MDHEIWTIDFIDENNTEGSASGDYSQYDEVCNRDLNHDLRKIFLPTVYAIIFVMGIVGNG
LVVIVMGCQKKSKTMTDKYRLHLSIADLLFVLTLPFWAVDAASSWYFGGFLCKVVNSIYT
VNLYSSVLILAFISLDRYLAVVRATNSQKPRRLLAEKIIYVGVWLPAALLTVPDLVFAQV
HDEGTRMMCDRTYPTESGYIWMTVFRFQHIVVGLVLPGLVILTCYCIIISKLSQGFKGLQ
KRRALKTTIILILAFFICWLPYCIAILVDTLTLLNVIQYSCTFLQHMEKWIFITEGLAYF
HCCLNPILYAFLGVKFKKSAKSALTVNSRGSSLKMLSKPKRGGLSSVSTESESSSFQSS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggatcatgaaatttggacaatagacttcatagatgaaaataacacagaagggtctgcc
tctggtgactatagccagtatgatgaagtctgcaacagagatttaaaccatgatctcagg
aagatatttctgcccacagtctatgctatcatttttgtgatgggcattgttggtaatgga
ctggtagtcattgtaatgggctgtcaaaaaaagtcaaaaactatgaccgataagtacagg
ctgcatctttccattgcagaccttctgtttgtcctcactctgcctttctgggctgtagat
gcggccagcagttggtactttggtggttttctttgcaaggtcgtcaatagtatctacact
gtcaacctgtacagcagtgtcctcatcttggcttttatcagtcttgatcgatacttggct
gtagtgcgtgcaactaatagccagaaacccagaaggctgctggctgagaagatcatttat
gtgggtgtttggcttcctgctgctctcctcacagtgccagacttggtgtttgcccaggta
cacgatgaaggaacccgaatgatgtgtgaccgcacctaccctactgagtcaggttacatc
tggatgacagtcttcaggtttcagcacatcgttgttggattagtgctcccaggtctggtc
attttgacctgctactgcatcatcatctccaagctctcccaaggtttcaagggcctgcaa
aagcgcagagcattgaaaaccaccatcattctcattcttgccttcttcatctgctggctt
ccgtactgcatcgccatattagttgacaccttgacgctgcttaatgttatccagtacagc
tgcaccttcctacaacatatggaaaaatggattttcattactgaaggtctggcttatttc
cactgctgtctcaatccaattttgtatgctttccttggagtcaagttcaagaaatcagcc
aagagtgcactgactgtcaacagcagagggtcaagcttaaaaatgttgtccaagcccaag
cgaggagggctttcatcagtttccacagagtctgagtcttcaagtttccagtccagctaa
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integrated database retrieval system
