Polyodon spathula (Mississippi paddlefish): 121323757
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Entry
121323757 CDS
T07273
Name
(RefSeq) exonuclease 3'-5' domain-containing protein 2-like
KO
K20777
exonuclease 3'-5' domain-containing protein 2 [EC:
3.1.11.1
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121323757
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
121323757
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121323757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RRXRR
Ribosomal_S14
Motif
Other DBs
NCBI-GeneID:
121323757
NCBI-ProteinID:
XP_041120890
LinkDB
All DBs
Position
12:18086477..18105051
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AA seq
624 aa
AA seq
DB search
MSRQTVISAAVVTLLGTTLGGLVIWKAVKSWRQKISKRNQNGELGKVRKREQQQEELEGV
VASEHSHWPMLPLPEQLLKVEPALVSRPDDWEEVWPAVQRELGVYPVLGIDCDWMSVKRK
AGPVVLLQMSTFSGLCVAIRLLKFQGDGQTIPRSLLDILQDDSILKAGVGCYEDACKLMR
DYGITVNCTVDLRYLAMRQRRTLIHNGLSLKSLAQDILNLSLDKSLQLRCSNWEAEELSQ
EQVTYAGRDAQVSVALFFHLLGLVSMTTPEGTAPESVCKQLLAKCQGLVDVPFKERGGGG
KEEEQEHGGALVSGDKKLWNRRTGSDSRAPADGQVVDPCKHKHKRLGVGYSARKSPLYDN
CFLHAPDGQPLCTCDKKKAKWYLDKGIGELLSEDPFIVKLKFEPSGRPESQQDYYLTAKE
NICVVCGRTESYIRKNIVPHEYRRHFPIQMKDHNSHDVLLLCTSCHAASNYHDNLLKQRL
SEEHCAPLGCEEGVRPLEDSDRRQVRSGARALLKADSLPESRREELLGTLRTFYSLDKIT
PALLQEAAGLETRIFSESYIPHGLKVVQAHAKGGLRGLMELEKRWRQHFLTSMQPCHIPP
LWSVEHNHSKLLRKYGEDLEIQLN
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtccagacaaacagtaataagtgcagctgttgtcaccctgctgggcactactttgggt
ggcctggtgatatggaaagcagtgaaaagctggagacagaaaatctccaaaaggaaccag
aatggagagctagggaaagtgaggaagagggagcagcagcaggaggagttggagggtgtg
gtggcgagcgagcattctcattggcccatgcttcccctgcctgagcagctgctgaaggtg
gaaccagccctggtgtcccgccctgacgactgggaggaggtgtggccagctgtgcagagg
gagctgggagtctacccagtactgggcatcgactgcgactggatgtcggtgaaaaggaaa
gctggccctgtggttctcctacaaatgtccacatttagtggtctctgtgttgccattcgt
ctgctgaaattccaaggggatgggcagaccatccctcgcagcctgctggacatcttgcag
gatgactccattctgaaagctggagttggctgttacgaagatgcctgcaagctgatgcga
gactatggaatcacagtaaactgcactgtggatctccggtacctggccatgaggcagaga
agaaccctcatccataatggcctgagcctgaagtcattggcgcaagacatcctgaacctc
tcccttgacaagtccttgcagctgagatgtagcaactgggaagctgaggaactttcccag
gagcaggtaacgtatgcgggcagagatgcccaggtatctgttgctttattctttcacctg
ctgggacttgtttccatgacaactccagaaggcacagctccggaaagtgtgtgcaaacag
ctgctggccaagtgtcaggggctggtggatgtgccattcaaagagagaggaggaggagga
aaggaggaggagcaggagcatgggggcgcattggtcagtggagacaagaaactctggaac
aggaggacagggtcggacagcagagctcctgcggacgggcaggtggtggacccctgcaaa
cacaagcacaagcgtctgggagttggttattcagccaggaagtctccgctatacgataac
tgctttctgcatgccccggatgggcagcccctgtgtacctgtgacaagaagaaggccaag
tggtacctggataagggaataggagagttgctgagcgaggatccgttcattgtaaagtta
aagtttgagccatcaggcagaccagagtcccagcaggattattacctcactgccaaggag
aacatctgtgtggtgtgtggaaggaccgagtcttacatcagaaagaacattgtccctcac
gaataccgacggcacttcccgatccagatgaaggaccacaactcccacgatgtgctgctc
ctgtgcacttcctgccacgcagcctccaattaccatgacaacctgctgaagcagcggctg
tcggaggagcactgcgcccccctggggtgcgaggagggagtgcggccacttgaggactct
gaccggcggcaggtccgctctggggcgcgagccctgctcaaagcagacagcctgccagag
agccgcagggaggagctgctggggaccctgcgcacattctacagcctggacaagatcaca
ccagccttgctgcaggaggcagccgggctggagaccaggatcttcagtgagagctatatc
cctcacggtctgaaggtggtccaagcccatgctaagggtggtctgcgcggcctgatggaa
ctggagaaacgttggcggcagcacttcctgacctccatgcagccatgccacatccccccg
ctgtggtccgtcgagcacaaccacagcaaactgctacgcaaatacggggaggatcttgag
atccagctcaactga
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