Polyodon spathula (Mississippi paddlefish): 121324506
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Entry
121324506 CDS
T07273
Symbol
actc1a
Name
(RefSeq) actin, alpha cardiac muscle 1a
KO
K12314
actin, alpha cardiac muscle
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04260
Cardiac muscle contraction
pspa04261
Adrenergic signaling in cardiomyocytes
pspa04814
Motor proteins
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121324506 (actc1a)
04820 Cytoskeleton in muscle cells
121324506 (actc1a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121324506 (actc1a)
04261 Adrenergic signaling in cardiomyocytes
121324506 (actc1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121324506 (actc1a)
04147 Exosome [BR:
pspa04147
]
121324506 (actc1a)
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
121324506 (actc1a)
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121324506 (actc1a)
Exosomal proteins of bladder cancer cells
121324506 (actc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
121324506
NCBI-ProteinID:
XP_041122414
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All DBs
Position
12:15356840..15361954
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AA seq
377 aa
AA seq
DB search
MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETAYNSIMKCDIDIRKDLYANNV
LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
KQEYDEAGPSIVHRKCF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacgaagacgagaccacagctcttgtgtgtgacaacggctctggactggtcaag
gcagggttcgccggagatgatgctccacgtgctgtcttcccctccattgtgggccgaccc
cgtcaccagggagtgatggtgggtatgggtcagaaggacagctatgtaggagatgaagcc
cagagcaagaggggtatcttgaccctgaagtaccctattgagcacggcatcatcaccaac
tgggatgacatggagaaaatctggcaccacactttctacaatgagctccgtgtggcccca
gaggagcaccccaccctgctcacagaggcccccctcaaccccaaggccaacagagagaag
atgacccagatcatgtttgagaccttcaatgtccccgccatgtatgttgccatccaggct
gttctgtccctgtacgcctctggccgtaccactggtatcgtgctggactctggagatggt
gtgacccacaacgtccccatctatgaaggttatgccctgccccacgccatcatgcgtctg
gatcttgccggcagagacctgactgactacctgatgaaaatcctgactgagagaggatac
tcattcgtcaccactgctgagcgtgagattgtgcgtgacatcaaggagaagctgtgctat
gtggctctggactttgagaatgagatggcaactgcagcctcctcctcctctctggagaag
agctatgaacttcctgatggccaggtcatcaccatcggcaacgagcgcttccgctgccct
gagaccctcttccagccttccttcattggtatggaatctgctggtattcatgagactgcc
tacaattcaatcatgaagtgcgacattgatatccgtaaggacctgtacgccaacaacgtg
ctgtctggtggtaccaccatgtaccctggtattgctgaccgcatgcagaaggagatcact
gccctggctcccagcaccatgaaaattaagatcatcgctccccctgagcgtaagtactct
gtctggatcggtggctccatcctggcctctctgtctaccttccaacagatgtggataagc
aaacaggaatatgatgaggcaggcccctccatcgttcacaggaagtgcttctaa
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