Polyodon spathula (Mississippi paddlefish): 121324864
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Entry
121324864 CDS
T07273
Name
(RefSeq) sequestosome-1-like
KO
K14381
sequestosome 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04137
Mitophagy - animal
pspa04140
Autophagy - animal
pspa04217
Necroptosis
pspa04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121324864
04137 Mitophagy - animal
121324864
09143 Cell growth and death
04217 Necroptosis
121324864
04218 Cellular senescence
121324864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121324864
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121324864
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121324864
Membrane trafficking [BR:
pspa04131
]
Autophagy
Mitophagy
Cargo receptors
121324864
Pexophagy
121324864
Aggrephagy
121324864
Xenophagy
121324864
ER-phagy
ER-phagy recepters
121324864
Other autophagy associated proteins
Midbophagy
121324864
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
121324864
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121324864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
zf-B_box
Motif
Other DBs
NCBI-GeneID:
121324864
NCBI-ProteinID:
XP_041123006
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All DBs
Position
12:28877962..28882870
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AA seq
386 aa
AA seq
DB search
MSMTVKAYLLGKEDVHREIRRFTVDQGVSSSFEYLSRKVAEVFQCLKSVSFNMYYKGKCG
GDRDATWPHHSETMRDRTGFPRSCCIGPVVGTRFKCTVCSDYDLCFPCQAKGIHREHPLL
PIWSPFQNTSEWLPRGKWLRKMRHGFPHCMWAGAQNRPHCSQPGPQPAQENTTGEPAGAS
ENQASADFLRNIGEGVAASLSQLGIDVDIDVEHGGKREKVTPTKPSFDGASAANNGKTEK
SGESSAAEPMASDLAADGQSGIQMNNEASKGQKQPGCDEEWTYLSPKEVDPSTGELQSLR
MEELDEGPSSLNPSLQGATRLREAAVYPHLPQNADPRLVESLAQMLSMGFSDEGGWLTRL
LQTKDFDIGSALDAIHYSKSTAPPHK
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgactgtaaaggcctatctgcttggtaaggaagatgtccacagggaaattcgc
aggtttaccgtggatcaaggggtttcgagcagcttcgaatacctgtccagaaaagtggcg
gaggtgttccagtgcctgaagagtgtgagcttcaatatgtactacaaaggtaagtgtgga
ggcgatagggatgccacctggccccatcattccgaaacaatgcgagacagaacaggattc
ccgagatcatgttgtattggtccggtcgtgggcacgcgcttcaagtgcactgtctgctca
gactatgacctgtgcttcccctgccaggcaaaggggattcatcgggagcatcctctcctc
cccatctggtctccgtttcagaacacctcggagtggctccctagggggaagtggttgcgc
aagatgagacatggctttccccactgcatgtgggccggagcccagaacaggccccactgc
agccagcctggcccacagcctgctcaggagaacactactggagagccagcaggagcctct
gaaaaccaggctagtgcggattttctgagaaacattggagagggcgtggcagcttcgctg
agccagctgggcatcgatgttgacattgacgttgagcatggtgggaagagggaaaaagtg
accccgaccaagccttcctttgatggagcctctgctgcaaacaacggaaaaacagaaaag
agtggggagagcagtgctgcagagcccatggctagcgacttggcagcagatgggcagagt
ggaatacaaatgaacaacgaggcctccaaggggcagaaacagccaggctgtgatgaggag
tggacctacctgtccccaaaggaagtagacccctcgactggggagctgcagtctctcaga
atggaagagttagacgaggggcccagctccctaaacccttcactgcagggcgccaccagg
ctgagagaggctgctgtttacccacacctgccccaaaacgcagacccgcgcctggtcgag
tctcttgctcagatgctgtcgatgggattcagtgatgaaggcggctggctgactcggctc
ctccaaaccaaggacttcgacatcgggtcagcactggatgccatccattattccaaatcc
actgctccgccccacaaatag
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