Polyodon spathula (Mississippi paddlefish): 121325276
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Entry
121325276 CDS
T07273
Name
(RefSeq) actin, aortic smooth muscle-like
KO
K12313
actin, aortic smooth muscle
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04270
Vascular smooth muscle contraction
pspa04371
Apelin signaling pathway
pspa04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
121325276
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121325276
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
121325276
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121325276
04147 Exosome [BR:
pspa04147
]
121325276
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
121325276
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121325276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
121325276
NCBI-ProteinID:
XP_041123641
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All DBs
Position
13:13119757..13126103
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AA seq
377 aa
AA seq
DB search
MCDEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAATSSSLEK
SYELPDGQVITIGNERFRCPETVFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
KQEYDEAGPSIVHRKCF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacgaggaagagaccaccgccctggtttgtgacaatggatctggcctctgcaag
gcaggcttcgccggggatgacgcccccagagctgtgttcccctccatcgtgggccgcccc
agacaccagggtgtgatggtgggtatgggtcagaaagacagctatgtaggtgatgaagca
cagagcaagagaggtatcctcaccttgaaataccccatcgaacacggcatcatcactaac
tgggatgacatggagaagatctggcatcactctttctacaatgagctccgtgttgcccca
gaagagcacccaacactgctgacagaggctcccctaaaccccaaggcgaaccgtgagaag
atgacccagattatgtttgagaccttcaatgtgccggctatgtacgtagccatccaagcc
gtgctgtccctttacgcttcaggtcgtaccacaggtatcgtgctggattccggggatggt
gtcacccacaacgtgcccatttatgaaggttatgccctgccccatgccatcatgcgtctg
gatctggctggccgggacctcactgactacctcatgaagatcctgactgaacgtggctac
tcttttgtgactactgctgaacgagaaatcgtccgcgacattaaggagaagctgtgctac
gttgctctggactttgaaaatgaaatggccaccgctgccacttcctcctcgctggagaag
agctacgagcttcccgacgggcaggtcatcaccattggcaacgagcgattccgctgcccc
gagaccgtcttccagccttccttcattggtatggagtctgccggtattcacgaaaccacc
tacaacagcatcatgaagtgtgacattgacatccgtaaagacttgtacgccaataatgtc
ctgtctgggggtaccaccatgtaccccggtattgcagaccgtatgcagaaggaaatcact
gctctggcccccagcaccatgaagatcaagatcattgctccccctgaacgcaagtactcc
gtctggatcggtggctccatcctggcctctctctccaccttccagcagatgtggatcagc
aagcaggagtacgacgaggccggcccatccatcgtccaccgcaaatgtttctaa
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