Polyodon spathula (Mississippi paddlefish): 121325613
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Entry
121325613 CDS
T07273
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein-like
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121325613
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
121325613
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
Motif
Other DBs
NCBI-GeneID:
121325613
NCBI-ProteinID:
XP_041124357
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All DBs
Position
13:166448..167983
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AA seq
511 aa
AA seq
DB search
MQIYGSTLACIVYRTLYLVDTSTGRLLENIALKTNGMLFLNSRQKNGIHFLSSTGMYLVK
ELGGDPTSKQLGCSDTARPDAALVEAVFEEACRYYQRRSLSSTQLTVEKLKSGGMFQAPI
SLSSILGVYMKTKKDSELPQGEGGYSKLLASLGTELESLMALEQLKASVVSASDRKLSVS
SETLVGQEVNRLFFSDLDRDNLLYLNVIFKTFPRESWQALQASLRLGSNGEGFLTAKAAP
EVWKMVLSPVQGAPAPLSSSQQQTPSNGAVPVFELICHSLFTFQPKWLYRFVELAQQQAG
VSSWNYGGKESPESVPLYKRALRVLPREGQAQELQVELLLCSQRPNAVMQAMLILLELRR
WERLAEVAQRFSQQSPLLNKEIFTTLLCEVSQHWDVDPYLDLLWTLCPKDMTVTSRSEPG
PFRTDRNQMTIGMLKPLLNKVLQRETKLSQRYLDIHQSPSFPPPTPPRQSHTVPRSVTEP
AMPTLSAPSISSSVNNTSVDKSCSSPRHENK
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctacggcagtaccctggcttgcattgtgtacaggacactgtacctggttgac
accagcactggcaggctgctggagaacattgcactgaagaccaatggcatgctgtttcta
aactccaggcaaaagaatggcatccacttcctttccagtacagggatgtacttggtgaag
gagttggggggggaccccaccagcaagcagctgggctgctccgacaccgccagaccagat
gctgccttggtggaggcagtcttcgaagaagcctgcaggtactaccagcgccggagcctg
agcagcacacagctgactgtggagaaactgaaaagcgggggcatgttccaggcgcccatc
tccctgtcttccattctcggggtctacatgaaaaccaagaaagacagtgagttgccgcag
ggggaaggaggttactccaagctgctggcatcgttgggcacggagctagagagcttgatg
gccttggagcagctcaaggcatcggtggtcagcgcctctgatagaaagctgagcgtctct
agtgaaactctggtggggcaagaggtgaaccgcctgttcttctcagacctggacagagac
aatctgctgtacctgaacgtcatttttaaaaccttcccccgagagtcttggcaagccctg
caggctagtttgcgactcgggtccaatggagagggcttcctaacggccaaggcagcccca
gaggtctggaagatggtcctgagccccgtgcagggagccccggcccctctctccagcagc
cagcagcagaccccctctaacggagcagtgcctgtctttgagctcatctgccactccctt
ttcaccttccagcccaagtggctgtacagatttgttgagctggcgcagcagcaagcaggg
gtctcttcctggaactatgggggcaaggagagcccggagagcgtccccttatacaagcgg
gccctgcgtgtgctgccgagggaggggcaggcgcaggagttgcaggtggagctcttgctc
tgcagccagagaccgaacgctgtcatgcaggccatgctcatcctgctggagctccggcgc
tgggagaggttggccgaagtggcccagcgcttctctcaacagagccccctgctcaacaag
gagatcttcaccacccttctctgtgaggtctcacagcactgggatgtggacccttacctg
gacctactttggaccttgtgtcccaaggacatgactgtcaccagcagaagtgagcccgga
ccattcagaaccgacaggaaccagatgaccatcgggatgctgaagccgctgttgaacaaa
gtgctgcaaagagagaccaagctgagccaaaggtatctggacatccaccagtccccttcc
tttccccctcccactcctccgaggcagtctcacactgtgcccaggtcagtcacagagccc
gccatgcccactctctctgcgccgagtatctcatctagtgtgaacaacaccagcgtggat
aaaagctgttccagtccccgtcatgagaataaatag
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