Polyodon spathula (Mississippi paddlefish): 121325953
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Entry
121325953 CDS
T07273
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type 6-like isoform X1
KO
K05697
tyrosine-protein phosphatase non-receptor type 6 [EC:
3.1.3.48
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04148
Efferocytosis
pspa04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121325953
09144 Cellular community - eukaryotes
04520 Adherens junction
121325953
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121325953
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121325953
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Non-receptor PTPs
121325953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
SH2
SH2_1
PTP-SAK
Tc-R-P
DSPc
PTPlike_phytase
PTP-NADK
Y_phosphatase3
DUF3536
Motif
Other DBs
NCBI-GeneID:
121325953
NCBI-ProteinID:
XP_041124974
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All DBs
Position
13:26017518..26050193
Genome browser
AA seq
648 aa
AA seq
DB search
MIECVISAADIKRRLLIQYTHCPDEICIALHWTTTRQRRDSRTSRLWTDNMPSCGWFHRD
LSGIEAEALLKSRGIHGSFLCRPSRKNQGDFSLSVRVGEMVTHIRIQNTGDFYDLYGGEK
FATLSELVEYYTTEHGTLQDQDGTLIELRFPLNCSEPTSERWYHGHLSGQAAEKLLWQKG
EEGTFLVRESLSKPGDFVLSILTGESREVNGEQRNRVSHVKIMCQDGCYTVGGVERFENL
TDLVEHFKQSGIEEVSGTRVYLKQPYYSTRINAADIDSRVQVLTKTNDADEASKSKAGFW
EEFDALQKQEAKLKKSRNEGMRPENKSKNRYKNILPFDETRVILQSGDPNVIGSDYINAN
YVSNLLMESCDRKKFIASQGCLATTVNDFWEMVWQERSRVIVMTTREVEKGRNKCVRYWP
EPEDTKEFGSYLVRHVSEHDAVDYTLRVLEISPLNQSDDQREIWHYQYLSWPDHGVPTEP
GGVLSFLEQVNSKQRELRGAGPIIVHCSAGIGRTGTIIVIDMVINTINTKGLDCDIDIPK
SIQMVREQRSGLVQTEAQYKFIYMAVSQYIETTKRKLEEMKKTETEYGNLHFPMAQHSKA
SRKLSKKKEDVYENLSLKGGKKEDKVKKQKSEEKDKAKSGKSGSVRKR
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatgtgttatcagcgcggcggatatcaagcgaagattattaatacagtacacg
cattgtcctgacgagatctgcattgctttgcactggacaaccactcggcagcggcgcgac
tcacgcacttccaggctttggaccgacaacatgccgtcctgcgggtggttccatcgtgat
ctcagtgggatcgaggctgaggcgctgctgaaatcccgtggaattcacggcagcttcctg
tgccgcccaagccgcaagaaccagggagacttctccctgtctgtcagggtgggtgagatg
gtgactcacattcggatccagaacacaggggatttctacgacctgtatggaggggagaag
ttcgccacactgtcggagcttgtggagtattacaccacggagcacgggacattgcaggac
caggacgggaccctcattgagctgcgctttcccttgaactgctctgagcccacctccgaa
aggtggtaccatgggcacctgtctggccaggctgctgagaagctgctgtggcaaaaggga
gaggagggcacctttctagtgagggagagtctgagcaagcctggagacttcgtcctgtca
atcctgaccggagagagcagggaggtgaacggagagcaaaggaacagagtctcacacgtc
aaaatcatgtgtcaggacggttgctacactgtcggaggtgtggagcggtttgagaaccta
actgacctggtggagcacttcaagcagagtgggatcgaggaggtgtctggcaccagggtc
tacctgaaacagccctactactcgactcgtatcaacgctgcggacatcgatagccgtgtt
caggtcctgacgaaaacgaatgatgccgatgaggcgagcaagagcaaggcgggattctgg
gaggagttcgacgctcttcagaagcaagaagccaaactgaagaagagtcgcaacgagggg
atgagaccagagaacaagagcaagaaccgctacaagaacatcctgccatttgatgagacc
cgtgttatcttgcagtcaggtgatcccaatgtcatcggctctgattacatcaatgcaaac
tacgtctcgaatctgctgatggagtcatgtgacaggaagaagttcattgcctcgcaaggc
tgcctcgccaccacggttaacgacttctgggagatggtgtggcaggagaggtcacgtgtc
atcgtcatgaccaccagggaggtagagaagggaaggaataagtgtgttcgttactggccg
gagccagaggatacaaaggaattcgggtcgtacctagtgagacacgtgagtgagcacgat
gcagtggactacaccctgagagtgctggagatcagtccactgaaccagagtgatgaccag
cgtgagatctggcattaccagtacctgagctggccagatcacggagtacccacggagccc
gggggggtgctcagcttcctggagcaggtgaacagcaagcagagagagctgaggggtgct
gggcccatcatagtgcactgcagtgctggaataggacgaactggaaccattatagtgatt
gacatggtgatcaataccatcaacacgaaaggactggactgcgacatcgatattccgaag
tccatccagatggtgcgtgagcagcgctctgggctggtgcagacagaggcacagtacaag
ttcatctacatggctgtctcccagtacatcgagaccaccaagaggaagctggaagagatg
aagaaaacagagactgagtatggaaacctacacttccccatggcccagcacagcaaagcc
agccgcaaattatccaagaagaaggaggatgtgtatgaaaacctgagtttgaagggaggg
aagaaggaggacaaggtgaagaaacagaaatctgaggagaaagacaaagccaagtctgga
aagagtggttctgtgcgcaagagataa
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