Polyodon spathula (Mississippi paddlefish): 121326189
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Entry
121326189 CDS
T07273
Name
(RefSeq) sodium-dependent noradrenaline transporter-like
KO
K05035
solute carrier family 6 (neurotransmitter transporter, noradrenalin) member 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121326189
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121326189
Transporters [BR:
pspa02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121326189
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GFIT
Motif
Pfam:
SNF
Caudo_bapla_N
Motif
Other DBs
NCBI-GeneID:
121326189
NCBI-ProteinID:
XP_041125323
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Position
13:complement(42799258..42819128)
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AA seq
626 aa
AA seq
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MNVQVRSDHKLSPVVPLTQYTTVEKKDVELILVKELNKVQYTNTAVIAVPETRVPVSSSE
DEERETWGKKIDFLLSVIGFAVDLANICRFPYLCYKNGGGAFLIPYTLFLVIAGMPLFYM
ELALGQYNREGAATVWKICPVFKGVGYTVIIIALYVGFYYNVIIAWSLYYLFASFTSEVP
WLRCGNPWNSPDCIDPKLLNGCVLLGNETKYSKYKITPAAEYYERGVLHLHESEGIHDLG
PPQWQLVLCLLVVVFILYFTLCKGVKTSGKVVYITATMPYVVLFVLVIRGITLPGAMDGI
RAYLHVDLKRLNNATVWIDAATQIFYSLGAGFGVLIAFASYNKFDNNCYRDAILTSTINC
VTSFFSGFAIFSVLGYMAYMHGVNIEDVATEGPGLVFIIYPEAISTLPGSTFWSIVFFLM
LLTLGIDSSMGGMEAIITGLTDDFKILKRNRKLFTFVTAFGTFLVALSCVTNGGIYVLTL
LDSFSAGTSILFGVLIEAIGVSWFYGVDRFSEDIERMMGFKPGLYWRLCWKFVSPAFLLF
VVIASIVKMETLTYDDYTFPPWASLIGWGITMSSMLFVPAYAIYKFLVVRGTFKERLAYC
ITPENEHHLVAEGNVRQFKLKHWLAI
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgcaagtccgctcagaccacaagctgtcgcccgtggtccccctcacacagtac
actaccgtggaaaagaaggacgtggagctgattctggtgaaggaactaaataaggttcag
tacaccaacacagccgtcatcgctgtcccggagacgcgcgtcccggttagctcctctgag
gacgaggagagggagacgtggggcaagaaaatcgattttcttctgtctgtcatcggtttc
gctgtggacctggctaatatctgcagattcccttatctgtgttacaaaaacggcggaggt
gcctttctgataccctacaccctgttcctggtcattgctggcatgcctctcttttacatg
gagctggcattggggcaatataaccgggaaggagctgccactgtctggaaaatctgccct
gtttttaaaggtgtgggctacactgtgatcattatagccttgtatgtgggcttctactac
aatgtaatcatagcctggtctctgtactacctgtttgcctcgttcacctccgaggtgccc
tggctgcgctgtggaaacccatggaacagccccgactgcatcgaccccaagctgctgaac
ggctgtgtgctgctgggcaacgagaccaagtactccaagtataaaatcactcctgctgca
gagtattacgagcgaggagtgttgcacctccatgaaagtgaagggatccatgacctgggc
ccaccgcaatggcagctggtgctgtgtctcctggtagtggtcttcatcctttacttcacc
ctctgcaaaggagtgaaaacctctggcaaggtggtgtacatcacagccactatgccgtac
gtggtgctgttcgtgttggtgatccgtggtattaccctgccgggggctatggatgggata
agagcctacctgcacgtagacttaaaacgcctgaacaacgccacggtctggattgacgca
gccacccagatattctattccctaggagcaggatttggagttttaatcgcatttgccagc
tataacaagtttgacaataactgctacagggatgctattctcacaagcactataaactgc
gtgacgagcttcttctcaggattcgctatcttctcagtcctcggctacatggcctatatg
catggggttaatatagaggacgtagcaactgaagggccaggattggtgttcatcatttat
ccagaagccatttcaaccctaccaggttcaacattctggtcaatagttttcttcctcatg
cttttaacgctgggcatcgacagttccatgggaggcatggaagcaatcatcacgggtctg
acagatgatttcaaaatcctgaagagaaacaggaagcttttcacctttgtgacggcattc
ggcaccttcctagtagctttgtcttgtgttacaaatggtggtatttatgtcctgactctg
ctggactcgttttcagcaggaacatccattctgtttggagtattgatagaggccatcggt
gtatcctggttttatggcgtggaccgattcagtgaagacatcgagcgcatgatgggcttc
aagccaggtctttactggaggctctgctggaagttcgttagccctgcctttctgctgttt
gtggtgatcgccagcatcgtgaagatggaaacactgacctacgatgactataccttcccc
ccctgggctagcctgatcggctggggaataacaatgtcttcaatgctctttgtgcctgct
tatgccatctataaattcctggtggtgcgaggcacgtttaaagagaggctggcttactgc
atcactcctgagaatgagcatcatcttgtagctgaggggaatgtccggcaatttaagctg
aagcactggctggccatatga
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