Polyodon spathula (Mississippi paddlefish): 121326883
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Entry
121326883 CDS
T07273
Name
(RefSeq) metal-response element-binding transcription factor 2-like
KO
K11485
metal regulatory transcription factor 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121326883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121326883
03036 Chromosome and associated proteins [BR:
pspa03036
]
121326883
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
121326883
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
121326883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mtf2_C
Tudor_2
PHD
Prok-RING_1
PHD_ash2p_like
SGF29_Tudor
ASH2L-like_WH
zf_RING_Vps8
PHD_NSD
DUF4537
Chromo
DUF1451
PHDvar_NSD
Ashwin
Motif
Other DBs
NCBI-GeneID:
121326883
NCBI-ProteinID:
XP_041126436
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All DBs
Position
14:5223308..5229381
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AA seq
592 aa
AA seq
DB search
MRDATGVGNLSVHKKTHSHRTHKTPVSLAKLPFKDGQKTKKLARKFEEGQDVLARWSDGL
FYLGTITKINKHKHSCFVVFEDSSKSWVLWKDIQTGASGGGEMVCTICQEENSEAPNEIV
ICDKCGQGYHQACHAPNIDSSVIGLDEKWLCRQCVFATTTKRGGALKKGPNAKALQVMKQ
ALPYTLEDLVWDEGHKTNIQQCYCYCGGPGDWYLKMLQCSKCRQWFHEACIQCFQKPMLY
GDRFYVFICSVCNSGPEYLTRLPLRWVDIAHLSLYNLSVIHKKKYFDSELELMAYINDNW
DRLQLSDLGDTPKCDRYDNILEALNKNKTMFMSGKEIKKKKHLFGLRIRFPPAPQNTDSK
TAQEPERASHEIKIKGRKSTKPLPDSSEVTNGVGRKRKYVGHSHETLAKLRRSSELSTQD
LDEPPVFENNSLDLLSLKRSDKSAQSSSTSDVESTGAASTTETTSTSISRQSSYFSSSRR
TRAGRLWPIARPPLRRGRRRGRRPRRTLQTSNPEIDGEEEPKDDCQFSGLDTDLVSNLDQ
EVQLNHLKNSITNYFGAAGRMACGEKYRVLARRVTLDGKVQYLVEWEGVTAS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagagacgctacgggagtggggaatttatctgtccacaaaaaaacgcattcccacaga
acccataagacacccgtgtccttggctaaactgccattcaaggatggacagaaaacaaaa
aagcttgcgaggaaatttgaagaaggccaggatgtcctagcccgatggtcagatggcttg
ttttatctcgggactatcacaaagataaacaaacataaacacagctgctttgttgtcttt
gaagacagttcgaaatcctgggttctctggaaggacatacaaactggagcaagtggtggt
ggggagatggtctgcacaatatgccaggaggaaaactcagaagcaccaaatgagattgtt
atctgtgataagtgtggccaaggatatcaccaggcgtgccatgcaccaaacattgattcc
agcgtgattggattggatgagaagtggctttgtcgccagtgtgtttttgcaacgacgacc
aagagaggcggcgctcttaagaaaggaccgaatgccaaagctcttcaagtcatgaagcag
gcgttgccatacacgttggaggacctggtgtgggatgagggccataaaactaatatccag
caatgttattgctattgtgggggacctggagactggtacctgaagatgctgcagtgcagt
aaatgtagacagtggtttcatgaggcctgcatacagtgtttccaaaagccaatgctttat
ggagacaggttctatgtatttatttgttctgtttgcaattctggaccagagtacctcaca
cgcctacccttacgatgggtagatatagcacacctgagcctttacaatctaagtgttatt
cacaagaaaaaatactttgattcagagctggagctgatggcatacattaatgacaactgg
gacagactacaactttctgatcttggagacactccaaaatgtgacagatacgataatatt
ctagaagcactaaataaaaacaaaaccatgtttatgtctgggaaagaaataaagaaaaag
aaacatttgtttgggctgagaattcgttttcctcctgctcctcagaatacagactcgaaa
acagcacaagagccagagagagcctcccatgaaatcaaaatcaagggcagaaagtctaca
aagcctctaccagacagcagtgaagtaacaaatggagtaggaagaaaaagaaagtatgta
ggtcattcacatgaaacgcttgcaaaactgagacggtcctcagagctctcaacccaggat
ctggacgaaccaccggtctttgaaaacaattccttggatctgctttctttaaaaaggagt
gataaatctgcacagtcctcgagtacctcggatgtggaatcgactggtgctgcaagcacc
actgaaactacctcaacaagcatttcaagacagtcaagttattttagctccagcaggaga
acccgtgcaggcagactgtggcccatcgctcgcccccctctgagaagagggaggaggcga
ggacggcgacctcgaaggacactccagacttcaaacccagagatcgatggagaagaagaa
cccaaggacgactgtcagttctcaggattagacaccgaccttgttagcaatttagatcag
gaggtgcagctaaatcacctgaagaattccatcactaattattttggtgctgctggaaga
atggcttgtggggaaaaataccgtgttttggctcgtcgtgtaactctcgatgggaaagtg
cagtatcttgtggaatgggagggagttactgcatcgtga
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