KEGG   Polyodon spathula (Mississippi paddlefish): 121328126
Entry
121328126         CDS       T07273                                 
Name
(RefSeq) lysine-specific demethylase 6A-like isoform X1
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pspa03036]
    121328126
Enzymes [BR:pspa01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     121328126
Chromosome and associated proteins [BR:pspa03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     121328126
   Histone demethylases
    121328126
SSDB
Motif
Pfam: KDM6_C-hel JmjC KDM6_GATAL TPR_1 TPR_8 TPR_17 TPR_2 TPR_16 TPR_12 TPR_CcmH_CycH TPR_19 TPR_11 TPR_7 TPR_9 SNAP ARM_TT21_C ANAPC3 DUF7017
Other DBs
NCBI-GeneID: 121328126
NCBI-ProteinID: XP_041128565
LinkDB
Position
15:complement(13289332..13379780)
AA seq 1489 aa
MKSCGVSLAAAACAAALSLGSAGDEEKKMAAGKASETEEDFPRLTAQERDSLAEIDSRVF
GFLRLHEDGARTKALLLKAVRCYDSLILKAEGKVEPELFCQLGHFNLLLEDYPKALSAYQ
RYYSLQSDYWKNAAFLYGLGMVYFHYNAFQWSPFSPSRHLQSPSTVTPTGKRRAIKAFQE
VLYIDPGFSRAKEIHLRLGLMFKVNTDYESSLKHFQLALIDSNPCTLSKAEIQFHIAHLY
EIQKKYRAAKEAYELLLQTENLPAQVKATTLQQLGWMHHTVDQLGDKANKESYAIQCLQK
SLEADPNSGQSWYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPM
DALQAYICAVQLDHGHAAAWMDLGTLYESCNQPQDAIKCYINATRSKSCSNTPALTARIK
YLQAQLCNLQQSSLQSKTKMLPSIEEAWSLPIPAELTSRQGAMNSAQQACKPHQNNEVGL
GQPQMSQQSLPLHMAPSSQVDDQSSPAKRKRTSSPTKNTSDSWASGHNASHHPGQQQVPN
WYLTPEKLQLLEQLRTNRQNLKPLQLQMLEQLEGQLVLMQQHQQQMRQTAAGQVRPTRVP
NGPTVDSSLPANSVSGQQPHVTLTRVPNVVPAGVHPVCPGQPVANGSFPASSVPCSTAGM
LGNTDTISVGNNHKTGMESNGNVPYLQQNALSLPHNCTNPTSSSAEEPWKNQHINATQGL
QKGHSSHLAGPNGERPLSSTGTSQHFQAAGTGIQNQVGHPTMPSNSLTQGAALNHFSTPP
HTATSGGQQGITLTKESKPSGNNNATSVPDISRHSGGTPNRTATVEGLPNHVHQVMADAV
SSPSHGESKSPGVLSSDNPQLSALLIGKANNIGGSGTCEKVNNVHPAVHNSKTPENSVAS
SPSSAISTATPSPKSTEQTTTNSVTSLNSPPSGLGHKVNGKCIEDSQSPLKVDHPLISHK
PNPPLAPSSSVSIYPSSVDVLKACRNLGKNGLSNSSVLLDKCPPPRLPPPPYPSLPKDKL
NPPTPSIYLENKRDAFFPPLHQFCTNPNNPVTVIRGLAGALKLDLGLFSTKTLVEANADH
LVEVRTQLSQPTDENWDLTGTKKMWRCESSRSHTTIAKYAQYQASSFQESLREENEKKGH
KDHSDNESTSSDNVGRRRKGPFKTIKFGTNIDFSDEKKWKLQLHELSKLPAFARVVSAGN
LLSHVGHIILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVPESYWGAM
NDFCEKNNINFLMGSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNI
AWNVGPLTAYQYKLAVERYEWNKLQSVKSIVPMIHLSWNMARNIKVSDPKLFEMIKFCLL
RTLKQCQMLKEALIVAGKEIVWHGRGKDEPAHYCSICEVEVFDLLFVTSESNSRKTYIVH
CQDCARKGSANLENFVVLEQYKMEDLMQVYDQFTLVSTIYVARYIYKTN
NT seq 4470 nt   +upstreamnt  +downstreamnt
atgaaatcgtgcggagtgtcgctagccgctgctgcctgcgctgccgctctcagtctcggc
tctgctggtgatgaggaaaagaaaatggcggcgggaaaagcgagtgaaaccgaagaggac
tttcctaggctgacagcgcaggagagagacagcctggccgaaatagacagccgagtgttt
ggatttttgaggcttcatgaagatggcgccagaacgaaggccttactgttaaaggctgtt
cgctgctatgattctttaatcttgaaagctgaaggaaaagtcgaaccagagttattttgc
cagcttggtcacttcaacctcttgctggaggattatccaaaagcattatctgcataccag
aggtactacagtttacagtctgactactggaagaatgctgcctttttatatggcctcggt
atggtgtacttccattataatgcatttcaatggtcccctttttccccatctaggcatttg
cagtccccctctacagtgacccctactggaaagagaagggcaattaaagcatttcaggag
gtgctttatattgatcccggcttttcacgggccaaggaaattcatttacgacttgggctg
atgtttaaagtcaacacagactacgagtcaagtctaaagcattttcagctggctttaata
gactcaaatccctgcactttgtccaaagctgaaattcaatttcacattgctcatttatat
gaaattcagaaaaagtatcgagctgcgaaagaagcttatgaactgcttttgcagactgaa
aatcttcctgcacaagtgaaggcaaccactctgcagcaattaggctggatgcatcacacc
gtggatcagttgggagacaaagccaataaagaaagctatgctattcagtgcctgcagaag
tctttagaagcagatccaaactctggacagtcctggtacttcctcggcaggtgctattca
agtattgggaaggttcaggatgcctttatatcttaccggcagtctattgataaatcagaa
gctagtgcggacacttggtgttcaataggggtgttgtatcaacagcagaatcaaccaatg
gatgcgttacaggcctatatctgtgctgtgcagttggaccatggccacgctgcagcctgg
atggacctgggtactctctatgaatcctgtaaccagcctcaggatgccatcaaatgttac
attaatgcaaccaggagcaaatcgtgtagtaatacccctgccctcacagcacggataaaa
tacttacaggctcagttgtgtaaccttcaacaaagtagtctacagagtaaaactaaaatg
cttcctagtattgaggaggcatggagcctaccaatccccgcagaacttacctccagacag
ggtgccatgaactcagcacagcaggcctgtaaacctcatcagaataatgaagtaggcctt
ggtcaaccacaaatgtcacagcagtccttgcctctgcacatggctccttcaagccaagta
gatgaccaatcaagtcctgccaaaagaaaaagaacgtcaagcccaacaaagaatacttca
gattcttgggcaagtggccacaacgcgtcacaccacccaggacaacagcaagttcctaac
tggtacttaacaccagagaaattacagctcttggaacagctgcggacaaacaggcaaaac
ctgaagccacttcagttacagatgctggaacagcttgaggggcagcttgtgttgatgcag
cagcaccagcaacagatgagacaaacagcagccgggcaggtacgaccaactagagttcct
aatgggccaacagtcgattcatcactgcctgcaaactctgtctctggtcagcagcctcac
gtgaccctgactagagtgcctaatgttgttccggctggagttcacccagtctgtcctggg
cagccagtggcaaacggatctttcccagcgagctcggttccctgcagcacagctggaatg
ctgggtaatacagacactatttctgtaggcaataatcacaaaacaggaatggaaagcaac
ggaaacgtgccttacctgcagcaaaacgcactaagtctacctcataactgcacaaacccg
accagcagcagcgcagaggagccgtggaaaaaccaacacattaacgccactcaggggctt
cagaaaggtcacagttcacatttggcaggtcctaatggtgaacgacctctctcttccact
gggacttcccagcatttccaggcagctggcactggtattcaaaatcaggttggacatccc
accatgcctagcaattcactaacacagggggcagctctcaatcacttctccactcctcct
cacacggctacctcaggcggacaacaaggcattaccttaaccaaagagagcaagccttca
ggaaacaacaacgcaacatcagtgcctgacatcagcaggcactctggagggacaccaaac
cgcactgccactgtagagggactccctaatcatgtccatcaggtgatggcagatgctgtt
tcaagccctagccatggagaatccaagtcaccaggtgtacttagttcagacaatcctcag
ctctctgccttgttgattggaaaagccaataatattgggggttctggaacctgcgaaaaa
gtcaataacgttcatccggcggttcacaactcaaagactccagagaattctgttgcctct
tcgccctcatcagccatttccacagcgaccccttctcctaaatcaactgaacaaactact
acaaatagtgttaccagccttaacagcccccccagtggattgggacataaagttaatggg
aaatgtattgaggactcccaaagccccttgaaagtcgaccatcctttgatcagtcacaaa
cctaatcctccgcttgcaccttcatcttctgtctctatatatcccagctcagtagatgta
ctgaaagcatgcagaaatcttggtaagaatggtctgtcaaatagtagcgttctattggac
aagtgtccccccccacgactgcctcctcccccttatccttcgctgccaaaggacaaactc
aaccctcctactcctagtatttatctggagaacaagcgagatgctttctttccaccttta
caccaattctgtacaaatccaaacaaccctgtcacagtaatccgtggccttgcaggagct
cttaaactagatctcggcctgttttctaccaagacattagtagaagcaaacgctgatcat
ctggtggaggtacggacgcaactgtctcagcccacggacgaaaactgggacctaactgga
acgaagaaaatgtggcgctgtgaaagcagtcggtcccatactaccattgccaaatatgca
cagtaccaggcctcatcattccaggaatcattacgggaggaaaatgaaaagaagggccac
aaggaccactcggacaatgaatcaacatcctccgataatgttggccggcggagaaaagga
cccttcaaaaccatcaagtttggaacaaacattgacttttcagatgaaaagaagtggaag
ttgcagcttcatgagttaagtaagctccctgcatttgcacgagttgtgtctgcagggaat
ctcctgagccatgttggacacatcatcctgggaatgaacacagttcagctctatatgaag
gttcctggcagcaggacgcctggtcatcaagaaaacaacaacttttgttctgtcaacatc
aacatcggcccaggggattgtgaatggtttgctgttccagagtcctactggggtgccatg
aatgatttctgtgaaaagaacaatattaacttcttaatgggctcctggtggccaaaccta
gaggatctgtatgaggcgaatgtccctgtgtatcggtttatccagcgtcctggagacctg
gtttggatcaatgcaggcacagtccactgggttcaggctattggctggtgcaataatatt
gcttggaatgttggaccactaacagcataccagtataaactcgcagtggagagatatgag
tggaataaactacaaagtgtgaagtctattgttcccatgattcacctgtcctggaacatg
gcacggaacatcaaagtgtcagatcccaagctcttcgaaatgattaagttctgcttgttg
aggacgttgaagcagtgtcagatgttgaaggaggctctcattgttgcagggaaagagatt
gtgtggcatggaaggggaaaagatgagcctgctcattactgtagcatctgtgaggtagag
gtctttgatctgctttttgtcactagtgagagcaattctcggaagacttacatagtgcat
tgccaggactgtgctcgcaaaggcagtgcaaacttagaaaattttgtggtgctagaacag
tacaaaatggaggacctgatgcaagtctatgaccagttcacattagtgagtacaatttat
gttgccagatatatttacaaaacaaattaa

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