Polyodon spathula (Mississippi paddlefish): 121329059
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Entry
121329059 CDS
T07273
Name
(RefSeq) caspase-9-like isoform X1
KO
K04399
caspase 9 [EC:
3.4.22.62
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04115
p53 signaling pathway
pspa04210
Apoptosis
pspa04370
VEGF signaling pathway
pspa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04370 VEGF signaling pathway
121329059
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121329059
04115 p53 signaling pathway
121329059
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121329059
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121329059
01002 Peptidases and inhibitors [BR:
pspa01002
]
121329059
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.62 caspase-9
121329059
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121329059
Peptidases and inhibitors [BR:
pspa01002
]
Cysteine peptidases
Family C14: caspase family
121329059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C14
CARD
DUF2576
Motif
Other DBs
NCBI-GeneID:
121329059
NCBI-ProteinID:
XP_041130280
LinkDB
All DBs
Position
16:complement(269843..293242)
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AA seq
438 aa
AA seq
DB search
MDARHKKILQSRRSFLVLELDPSLLYDGLISRGIFNQDMIDEIKSAGPRRDQARQLMIDL
ETRGSRAFPAFLECLVETGQSRVADLLSADLGIQPPCSLPIQPIPIPISIPTSRNHGTQQ
KEMDKPDRGHISRKDEGVEKSADHPIQCSEGDERPSIPRLRRDSLQMYRMDARPCGQCLI
INNVEFHPDSNLKNRTGSDIDCARLEKRFKSFHFIVEVKRNLTSQAIRRELHALSQTDHT
AFDCCVVIILSHGTEVNHNRFPGAIHGVDGPIVPVQNITNYFNGQNCPTLQGKPKLFFIQ
ACGGDQKDRGFEVSPDEFEPAAGGIDDHTDATPMSPREELGEDSDEPDARASLPTPSDIL
VSYSTFPGYVSWRDTQAGSWYVETLDNVLEEFAGYEDLLTLLTMVTDKVSQISAKGIFKQ
MPGSFNFLRKRLFFQVNC
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggatgccagacacaagaaaattctgcaaagcagacgctcctttctggtgcttgaattg
gatccatctctgctgtacgatggactgatttccagaggaatattcaatcaagacatgatt
gatgaaataaagagcgcaggacctcgcagagatcaagccaggcagcttatgatcgacctg
gagacccggggaagccgggctttccctgcctttctggagtgccttgtggaaacaggccag
agccgtgtggcagatctcctgagcgctgaccttgggattcagccaccttgttcccttccc
attcaacccatcccaatacccatctcaatacccacctctcgcaatcatggaacacagcaa
aaggaaatggacaaaccagacagaggacacatctctagaaaggatgagggtgtggaaaag
agtgctgatcaccccattcaatgttctgaaggagatgagcgtccttctatacccagacta
aggagagacagtcttcagatgtacagaatggatgcgaggccttgcggtcaatgcctgatt
attaataatgtggaatttcatccagacagtaatctgaagaaccgcacaggatctgacatt
gattgtgccagacttgagaaacggttcaagtcatttcacttcattgttgaggtgaagaga
aacctcacatcgcaggcaataagacgagagctgcatgccttgtcacagacagaccacact
gccttcgactgctgtgttgtaataatcctgtcccatggcactgaggtgaaccacaacagg
tttccaggtgctatccatggtgttgatggcccaatagttccagttcagaatattaccaat
tattttaatggacaaaactgcccaacactacaagggaaacccaagctcttcttcatccaa
gcgtgtggtggagatcaaaaagacagagggtttgaggtctctccagatgagtttgagccg
gcggccggtggcattgacgatcacacagacgccacgccgatgtcacccagggaggagctt
ggggaagactctgatgagcccgatgccagagcaagcctgcccactcccagtgatatctta
gtgtcatactccacttttccagggtatgtgtcttggcgagacacacaagcaggttcttgg
tatgtggaaactctagacaatgttttggaagaatttgctggatatgaagacctgcttact
ttgctgacgatggtaacagacaaggtgtcacagatttcagctaaaggaatcttcaaacag
atgcctggatccttcaatttcctgcggaaacgtctcttcttccaagtgaactgttaa
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