Polyodon spathula (Mississippi paddlefish): 121329247
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Entry
121329247 CDS
T07273
Name
(RefSeq) serine/threonine-protein kinase PINK1, mitochondrial-like
KO
K05688
PTEN induced putative kinase 1 [EC:
2.7.11.1
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121329247
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pspa01001
]
121329247
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121329247
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121329247
Enzymes [BR:
pspa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
121329247
Protein kinases [BR:
pspa01001
]
Serine/threonine kinases: Other
NKF2 family
121329247
Membrane trafficking [BR:
pspa04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
121329247
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
121329247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
APH
DUF5538
Motif
Other DBs
NCBI-GeneID:
121329247
NCBI-ProteinID:
XP_041130673
LinkDB
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Position
16:complement(20011171..20024129)
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AA seq
576 aa
AA seq
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MSVRHAIGRGLELGRSVLQLGLLKPAARVAAKFRGERLRLSQTSSRVQPQTFLPGRYRYY
RVSLSGLAAQLQRRVFWRIPSSGSPRNRAVFLAFGVGLGLIEQQLEEDRTVVTTCQGIQA
LFHNKAKKHESPLKPFTTGYKLEDYVIGQQIGKGCNAAVYEATAPFAAPWKPEQVHVQSP
PRGEALLDTGLTLTSRPARLPLAVKMMWNITAGSSSESLLRAMGQELVAAPPVAMSRERG
TAALNGQFGCIRKKLEPHPSVIQVFRAFTADVPLLPGAWADYLDMLPARLNPDGIGHNRT
LFLVMKNYPCTLRQSLQVSLPDNREATLLILQLLEGVDHLNRQGIAHRDFKSDNILLERD
SVGCPRLVITDFGCCLAEQHLWLKLPFNSYGVDRGGNACLMAPEVSTSYFVPGPGVVIDY
SKADAWAVGAIAYEIFGLPNPFYTAGPEGLESRTYQEKQLPPLPSTVPPEARLVVKLLLR
RNANKRPSARVAANLLHICQWGGNLQNVDRMKMQKIADWLLCRSAAALLHAGYNAGNMVE
AELQRNFLSNVDLGELRMAMAFLSCEWIMRDLVCVH
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttagacatgctataggccgtgggctggagctgggacgctcggtactgcagctc
gggcttctgaaaccagcggcccgggttgcagctaagttccgaggagagcgactcaggcta
agccaaacctccagccgagtacagcctcagactttcctgccgggtcgttatcggtattac
cgagtgtctctcagcgggcttgcggctcagctgcagcggcgggtgttctggaggattccc
agttcgggctcccccaggaacagagctgtgtttttggctttcggggtaggcttgggtctt
attgaacaacagctggaagaagacagaacggtcgttacgacatgtcagggaattcaggca
cttttccataacaaggcaaagaaacatgaaagcccactaaagcccttcaccaccggctac
aaactggaggattacgtcattggacagcagattgggaaaggctgtaacgctgcagtgtac
gaggctactgctccattcgctgccccctggaaacctgagcaagtccatgtgcagtcaccc
cccaggggggaagcgctcctggacaccggcctcactctgacaagccgtccagctcggctc
ccgctggctgtgaaaatgatgtggaatatcacggcaggatcttccagtgagtctctcctg
agagccatgggtcaggaattggttgcagctcctccagttgctatgagcagagagagagga
acagctgcactaaatgggcaatttggctgcatcaggaagaagctggagcctcatcccagt
gtaatccaggttttccgcgcttttactgcagatgtgcctctgctacctggtgcctgggct
gattatcttgatatgctgcctgccagattgaatccagatggcatcggacacaaccgcacc
ctgttcttagtaatgaagaactacccctgcactttgcggcagtccctgcaagtttccctt
cctgacaacagggaggcgactctgctgattctgcagctgctagaaggagtggatcatctg
aacagacaaggaatcgctcacagagacttcaaatctgacaacatcctgctggagcgtgat
tcagttggctgcccacgcctggtgatcacagattttggctgctgtctggctgagcaacac
ttgtggttgaagctaccctttaacagctatggtgtcgatcggggtggaaatgcttgcctc
atggcacctgaagtaagtacttcatactttgtcccaggtcctggtgttgttattgactac
agcaaagcagacgcctgggcagtgggtgctattgcctatgaaatctttgggctgcccaac
cccttctatactgcaggcccagagggactagagagcaggacttaccaggagaagcagctc
cccccgctgcccagcactgtgcctcctgaagctcggcttgtggtaaaactgctgctgcgc
agaaatgcaaacaagcgcccaagtgctagagttgctgccaatttgctccacatttgtcag
tggggtggaaatctccagaatgtggacagaatgaagatgcagaagattgctgactggctt
ctgtgccgctccgctgctgcactgctgcatgctgggtacaatgctggaaacatggtggag
gcggagctgcagagaaacttcctctccaatgttgacttgggagagctgcgaatggccatg
gcttttctgagctgcgaatggataatgagggacttggtttgcgtacattag
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