Polyodon spathula (Mississippi paddlefish): 121329712
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Entry
121329712 CDS
T07273
Name
(RefSeq) LOW QUALITY PROTEIN: tectonin beta-propeller repeat-containing protein 2-like
KO
K23881
tectonin beta-propeller repeat-containing protein 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121329712
Membrane trafficking [BR:
pspa04131
]
Autophagy
Other autophagy associated proteins
Others
121329712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hyd_WA
Beta-prop_HPS5
Tectonin
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_IFT140_1st
WD40
Beta-prop_WDR19_1st
WDR55
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
121329712
NCBI-ProteinID:
XP_041131342
LinkDB
All DBs
Position
17:37553535..37579462
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AA seq
1377 aa
AA seq
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MAANSPPVPLKKFCPLYYLLNAIPAKVQKGFRSVLVYLTALDAXAVGSSIGMLYLYCRRL
NQMKKYNLEGKSESITTVKLLSCFDDLVAVGTASGRVVLFQLVCPLPGRNKQLRRFDVVG
LHKSTVTALAWSANGMKLFSGDDKGKIVYSSLDLDQGVCNPSVLLEEQSAVVQLDYSQKV
LLVSTCQRCLLFYTEHNAVQQIGTKPRKSSGRFGACFHPCLCKQSESQXRQLGQVFCFLR
EGWLLSWNEYSVYLVDSGSQTVIGGLEGSGDIVSVSCTEHEIFLLKGDRDIIRISNRPEG
LPSTDSASRLNSPLATIPSILTPTGPVETAQQIRTMSIISEFGDKRTDVLLLARDDQEPA
VLWHRPPESQAGDPIGIVTEPSTELGQKGSPVTSETRSRSSSVNSWDSAVGLGATVDHTA
SEVSADSPHSSARFSAISVEEFAQELVVKSIKVKKKNKKKRRQDSGNQMSENSWSDGVFV
PESDGPSTLACDFLSDRTSLLGSSLDLQSTDSPDRVSLVQEDNCSDVFSVLQSPELVSIA
PNKELDTDLLSAAELQHAGPRERFVPVSPPASFTPLESRDAQTETPTCLQSEDHKLLQSG
QERPADSAVPDLQNHMQNWESVARNQTASECYSWSSQSAEDSKPREVGTASAEPTNRQSS
SSEGPLFPSTHAPFAGEEAEPPNRSDSQEMYPEDLVNLSDAMNDATECESVRYVRTETCN
QEPVSLSSDDEDIYGHGMSHSCSKTSMADGVSGTSHPEDQMKSSLDDSSLFRSDQFAESW
MGYSGPGYGILSLVVSEKYIWCLDFKGGLYCSALPSAGLRWQKYEDIVQQVAVSPSGALL
WKIELKTNKAFACAKVTIKGKRHWYEALPQAAFIALSDDTAWIIRTNGDRYLQTGLSIER
PCARTVKVDCPCPLSQIASRDNVVWALTEQRAVFCREGLSSFCTEGERWKYDAVSERQGL
EPVCISLGDHHTAWALDTNGNLWFRTGVTPKKPQGEDDHWWQVSITDYVVFDQSSLFQTI
IHASHTLASAAQAPVEKVADKLRVVFWTQQPQCQPSLISVNTGGVWITSGKNVSRERFKR
EGCAQRERFKREGCAQRERFKRERFEGCAQRERFKREGCAQRERFKREGCAQRERFKREG
CAQRERFKREGCAQRERFKREGCAQRERFKREGCAQRERFKREGCAQPMLLEEVHELVVS
QPAFSAILLLRSNRTADLNGEYQESREQPVGMHLVSVHTSPNDKMLWAVDSKGNVHVRTG
ITEDVPVGTDWEHIPGLQAGELTVSSRTVWVRCPNGDVARRYGITDKNPAGDYWKKVPGC
VACLTVTPLDELWAISQSGGLIQRLTKTFRHDSTSAKPSGSAVSVQSEDLEEEWEVI
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaacagccccccggtgcccctgaagaagttctgcccgctgtactacctgctg
aatgccatcccagccaaggtgcagaaagggttccgctcagtgctggtgtacctgaccgct
ctggatgccnnagcagtgggcagcagtattgggatgctctatctgtactgcaggaggctg
aaccagatgaagaaatacaacctggaggggaagtcggaatccattaccacggtgaaactg
ttgagctgcttcgatgatctagtggctgttggcacagcttcgggcagagtggtgctcttc
cagctggtctgccctttgcctgggagaaacaaacagctgcggcgctttgatgtggtcggc
cttcacaaaagcaccgtgactgctctagcttggagtgctaatggaatgaaattattctct
ggggatgacaaaggcaaaattgtctattcttctctggatctggaccagggtgtttgtaac
cccagtgtgctgctggaggagcagtctgctgtagtgcagctggactacagtcagaaagtg
ctgctggtgtcgacctgccagcgctgtctgcttttctacacagaacacaacgcagtccag
cagatcggaaccaagcccaggaaaagcagtggcagattcggggcctgtttccacccctgc
ctgtgcaagcagagtgagagccagnagaggcagctggggcaggtgttctgcttcctcagg
gagggctggctgctcagctggaatgagtacagtgtgtacctggtggattcagggagccag
actgttattgggggtttggaaggatctggcgacattgtgtctgtctcgtgcacagagcat
gagatctttctgttgaagggagaccgcgatatcataaggatttcaaaccgtccggaagga
ctgccatcaacagattcagcttcgagactaaacagtcctctcgctacaatcccgtccata
ctgacaccaacagggcccgtggagaccgcccagcagatcagaacaatgtcaatcatttca
gaatttggggacaaaaggacagacgtgctgctgctggcacgggacgaccaggagcctgca
gtgctgtggcacaggccgccggagtcccaggccggcgatccgataggaattgtgacggag
ccgagtaccgaactggggcagaaagggagcccggtcaccagcgagaccaggagccgcagc
agctctgtcaactcctgggacagtgcggtggggctgggggccactgtggaccacacagcc
tccgaagtgtctgcggacagtccccactcctctgcacggttcagcgccatcagcgtggag
gaattcgcccaggagctggtggtcaagtccatcaaagtgaagaagaagaacaagaagaag
aggaggcaagacagtggaaaccagatgtctgaaaacagctggtctgacggggtgttcgtt
ccagagagcgacggccccagcaccctggcgtgtgacttcctgtcggacaggaccagcctc
ctgggcagcagcctggacctgcagagcacggactccccggacagagtgagcctggtgcag
gaggacaactgctccgacgtgttcagcgtgcttcagtctccagagctcgtctccatcgcc
ccaaacaaagagctcgacacagacctgctcagtgctgctgaacttcaacatgctggaccg
agagagcgcttcgtacccgtttcacctcctgcctcgtttacacccctggaatcaagggat
gctcagaccgaaacccccacatgtttacagtcagaagaccacaagctgcttcaaagtggt
caagaacgccctgctgacagcgctgttccagatcttcagaatcacatgcaaaattgggaa
agtgttgctcgtaaccagactgcctccgaatgttacagctggagctcacagtctgctgag
gacagcaagcccagggaggtgggtactgcatcagcagagcctacaaacagacagtcatcc
agttcagaggggccactgtttccctcaacgcacgctccctttgcaggagaggaagctgaa
cccccgaacaggtccgacagtcaggagatgtatccagaggacttggtgaatctgagcgat
gcaatgaatgatgccactgaatgtgaatcggtccgttatgtgagaactgagacgtgtaat
caggagccagtgtcgctctcaagcgatgacgaagatatctacggccacggaatgtcgcat
tcttgctcgaagaccagtatggctgatggcgtctctggtacaagtcatcctgaagaccaa
atgaaatccagtctagatgattcaagccttttcagatctgatcagtttgcagagagttgg
atgggctactctggccctggctatggaatcctgagcctggtggtctcggagaagtatatc
tggtgtctggatttcaaagggggtctctactgcagcgccttgcccagtgcaggactgcgg
tggcagaaatatgaggacattgtccagcaggtggcagtatctccttcaggtgcgctgctt
tggaagattgagctgaaaaccaacaaggcgttcgcttgtgcaaaagtaacaataaaggga
aaaagacactggtacgaggccctgcctcaggcagccttcatagccttgagtgacgacacc
gcctggatcattcggaccaatggagaccggtacctccagacagggctgagtatcgagcgt
ccgtgtgcccgaacggtgaaggtggactgcccctgccctctgtcccagatcgcctccaga
gacaatgtggtgtgggccctgaccgagcagagagctgtgttctgtagagaagggctcagc
agcttctgcacggagggggagcggtggaagtacgacgcagtcagtgaaagacagggactg
gaacctgtgtgcatttctctgggagaccaccacaccgcctgggctctggacaccaatggg
aatctctggttcaggaccggagtcactccaaagaaacctcaaggggaggacgatcactgg
tggcaggtgagcatcacagattacgtggtgttcgatcagagcagcctcttccagacgata
atccacgcctcgcacaccctggcaagtgccgcccaggcaccagtggagaaggtagctgat
aaactgcgagtggtgttctggacacagcagcctcagtgccagcccagcctcatcagcgtc
aacactggtggggtctggatcacctctgggaagaatgtctcccgtgagaggtttaaacgc
gagggctgtgcgcagcgtgagaggtttaaacgcgagggctgtgcgcagcgtgagaggttt
aaacgtgagaggtttgagggctgtgcgcagcgtgagaggtttaaacgcgagggctgtgcg
cagcgtgagaggtttaaacgcgagggctgtgcgcagcgtgagaggtttaaacgcgagggc
tgtgcgcagcgtgagaggtttaaacgcgagggctgtgcgcagcgtgagaggtttaaacgc
gagggctgtgcgcagcgtgagaggtttaaacgcgagggctgtgcgcagcgtgagaggttt
aaacgcgagggctgtgcgcagcccatgcttttagaagaggtgcatgaattagtcgtctct
cagcctgccttctctgccattctgttattgaggtctaataggacggctgacctgaatgga
gaatatcaggagagccgtgagcagccagttgggatgcacctggtgagtgttcacaccagt
cccaatgacaaaatgttgtgggccgttgacagtaaagggaatgtccacgtgcggactgga
atcacagaggacgtgcctgtggggactgactgggagcacataccagggctgcaggcagga
gagctgacggtgagcagtaggacagtttgggtgcgttgtcctaatggcgatgttgctcgg
cgatacggcattaccgataaaaacccagccggagattactggaagaaagtccctggatgt
gttgcttgtttgacagtgactcctctggatgagctgtgggccatcagccagtcagggggt
ctgattcagcgcctcaccaagaccttccggcatgacagcacttcagcaaagcccagcggc
agtgcagtgtccgttcagtccgaggacttggaggaggaatgggaagtcatatag
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