Polyodon spathula (Mississippi paddlefish): 121329947
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Entry
121329947 CDS
T07273
Name
(RefSeq) actin, aortic smooth muscle-like
KO
K12314
actin, alpha cardiac muscle
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04260
Cardiac muscle contraction
pspa04261
Adrenergic signaling in cardiomyocytes
pspa04814
Motor proteins
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121329947
04820 Cytoskeleton in muscle cells
121329947
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121329947
04261 Adrenergic signaling in cardiomyocytes
121329947
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121329947
04147 Exosome [BR:
pspa04147
]
121329947
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
121329947
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121329947
Exosomal proteins of bladder cancer cells
121329947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
121329947
NCBI-ProteinID:
XP_041131988
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All DBs
Position
17:1802458..1807400
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AA seq
377 aa
AA seq
DB search
MCDEEETQALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPVLLTEAPLNPKANREK
MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPVYEGYALPHAIMRL
DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNGIMKCDIDIRKDLYANNV
LSGGTTMYPGIGDRMQKEITALAPSTMKIKMIAPPERKYSVWIGGSILASLSTFQQMWIS
KDEYEEAGPSIVHRKCF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacgaggaagagacacaagccctggtctgtgacaatgggtcgggactctgcaag
gcaggattcgccggggatgatgcccccagagctgtcttcccatccatagtgggccgtccc
cggcaccagggtgtcatggtcggtatgggacaaaaagacagctatgtaggagatgaggca
cagagcaagagaggtattctaactctgaaataccccatagaacacggcatcatcaccaac
tgggacgacatggagaagatctggcaccattccttctacaatgagctccgtgtggcccca
gaagagcaccctgtattactcactgaggcacccttaaaccccaaagccaacagagaaaaa
atgacacagatcatgtttgagactttcaatgtccctgcgatgtatgtagcaatccaggcc
gtgctttctctctatgcttctggccgtaccactggtatcgtgctggactctggggatggc
gttactcacaacgtccccgtctatgagggttatgctcttccccatgctatcatgaggctg
gacctggctggcagagacctgacggactacctcatgaaaattctcaccgagagaggctac
tcttttgttaccactgctgagcgtgagattgtgcgggacatcaaggagaagctctgctat
gtggccttggactttgaaaacgaaatggcaacggcagcatcctcctcctctctggaaaaa
agctatgaactacccgatggccaggtcatcaccataggaaacgagaggttcaggtgccca
gagaccctcttccagccttctttcattggtatggaatctgcaggcattcatgaaaccact
tacaacggcataatgaaatgtgatattgatattcgcaaggatctctacgccaacaacgtg
ctgtctggcggaaccaccatgtaccctggcataggggaccgaatgcaaaaagagatcaca
gctttggcaccaagtactatgaagatcaagatgatagctcccccagagaggaagtactca
gtgtggatcggcggctccattctggcctctctgtctaccttccagcagatgtggatcagc
aaagatgaatacgaagaagccggcccctccattgtccatcgcaaatgtttctaa
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