Polyodon spathula (Mississippi paddlefish): 121330422
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Entry
121330422 CDS
T07273
Name
(RefSeq) C-Jun-amino-terminal kinase-interacting protein 1-like isoform X1
KO
K04434
mitogen-activated protein kinase 8 interacting protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121330422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121330422
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
121330422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
SH3_9
SH3_1
SH3_2
Motif
Other DBs
NCBI-GeneID:
121330422
NCBI-ProteinID:
XP_041132876
LinkDB
All DBs
Position
17:complement(1533262..1572043)
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AA seq
716 aa
AA seq
DB search
MADREKINPSPSGSPFLGLQAAPPLNFRLTHDISLEEFEDEDLSEITEITDECGMSLNCN
DSLDIMSHVSRETNSVAGKAGGREASKLQAEMLQLDLIDAVGDIEDEEAELPIKEPLVKE
PAPVTMDTYRPKRPTTLNLFPQVPRTQDTLNNNSFGKKYSWQEKVSRSSSPLKTGELTPT
HDHICLSDEDKVQHNTTQTKDRGTSTDTPCRRTSSTQSSGGTRSKLHDKPTATGGLQLQQ
HSKGQPEGHRDRIRYHTDVRLEATEEIYLTPVQKNSDSLEHDKPFLSQSSENRMSISSDI
DTTHYQSLPNRTNPSISEEDEVYTTTSALDKMSASRNTDHGGSAFQTASDVPRTSVSSEA
SGLSYDSVKYTLVVDENMQLDLVSLKQCYSRYSDDSDSATVYDNCVSSPYESAVGEDDEE
DALKRDSVCLSEDSTPETDLPFSRKFLNVFMHGRSSSSSAESFGLFSCVINGEEREQTHR
AVFRFVPRHDDELELEVDDPLLVEVQADDYWYEAYNMRTGLRGIFPAYYAIEVTKEPERY
KETEKSSEWVDKFQAKFLGSVQVPYHKGNDVLCVAMQKIATNRRATVQFNPTSSCILEIN
VKGIKIVVQPDDYSEYEREFTCSGRKLGRMFALKSGVNQCSHFFQLKNISFCGYHPKNHK
YFGFITKHPADHRFACHVFVSEDSTKPIAESVGKAFQQFYKEYVEYTCPTEDIYLE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcggatagagaaaaaataaacccttctccatctggatcccctttcttgggactgcag
gctgcaccgcctcttaatttcaggctgacccatgatatcagtctggaggagtttgaagat
gaggatctctctgagataacagagatcacagatgaatgtggaatgagcctgaattgcaat
gacagcctggacatcatgagccatgtgagccgggagaccaatagcgtggcagggaaagca
ggtgggcgtgaggccagcaagctgcaggcagagatgcttcagttggatttgattgatgcc
gtgggtgatatagaggacgaggaagctgaactgcccataaaggagcctctggtgaaggaa
cctgctccagttaccatggatacctacaggcccaagagaccgaccacccttaacctcttc
ccacaggtgcctcggactcaggacacactaaacaacaactcatttggtaagaagtacagc
tggcaggaaaaggtctctcgttcatcttcccccttaaaaacaggagagttgacaccaacc
catgatcacatctgcctaagcgatgaggataaagtccaacacaacacaacccagaccaaa
gacagaggcacttctacagataccccatgccgccgcacctcctccacccaaagcagcggg
ggaacgcggtccaaactgcacgacaaacccacagccacgggaggactgcaactgcaacag
cacagcaagggccagcccgagggccacagggaccgcatccgctaccacaccgatgtgcgg
ctcgaagccacagaggaaatctacttgacaccggtgcagaaaaactcagactctttagag
catgacaagcctttcctgtcccagtccagtgaaaaccgaatgtccataagctctgatata
gacacgactcattaccagtccctgcccaaccggacaaacccttccattagtgaggaggat
gaggtttacaccacaacctcagccttagacaagatgagtgcttctcgaaacacggaccac
gggggcagtgcttttcaaacagcctccgacgtcccacggacttctgtcagctctgaggct
agcggcctctcgtacgattctgtcaaatacaccttggtggtggatgagaacatgcagctg
gatctggtcagtttgaagcagtgctattccagatacagcgacgacagcgactcggctacc
gtctatgacaactgtgtctcctcgccctacgagtcggctgtcggcgaagatgacgaggag
gacgcgctcaagcgggattctgtgtgcctgtctgaggactccaccccagaaacagacctc
cctttctcacgaaaattcctcaacgtgttcatgcatggcaggtccagctcatcaagtgct
gaatcatttggattgttctcctgtgtaattaatggagaggagagggagcagacccatcgg
gcagtgttcaggtttgtcccgcggcatgatgatgaattggaactggaggtggacgaccct
ctcctggtggaggtgcaggctgacgattactggtacgaggcctacaacatgaggacaggg
ctgagaggcatcttccctgcctactacgccattgaggtcaccaaggagccagagcgctat
aaagaaacagagaagagtagcgaatgggtggacaaattccaggcaaaattccttggttca
gtgcaagttccatatcacaaagggaacgacgtgctctgtgtggctatgcaaaagattgct
accaacaggagagcgactgtgcaattcaaccccacttccagctgtattttagagattaat
gtgaagggaattaaaatagtagtacaaccagatgattacagtgaatatgaaagggagttt
acttgttctgggagaaagctggggagaatgtttgccttaaagtctggggttaaccagtgt
agtcacttctttcagctgaagaatatctccttctgtggataccatccaaagaaccacaaa
tactttggatttataaccaaacacccagcggatcacagatttgcctgtcatgtttttgtc
tctgaagactcaactaaaccaattgcagagtcagtagggaaagcattccagcagttctac
aaggaatatgtggagtacacgtgcccaacagaagacatttacttggaatag
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