Polyodon spathula (Mississippi paddlefish): 121330521
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Entry
121330521 CDS
T07273
Name
(RefSeq) platelet-derived growth factor subunit A-like isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04020
Calcium signaling pathway
pspa04510
Focal adhesion
pspa04540
Gap junction
pspa04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121330521
04020 Calcium signaling pathway
121330521
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121330521
04540 Gap junction
121330521
09142 Cell motility
04810 Regulation of actin cytoskeleton
121330521
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pspa04052
]
121330521
00536 Glycosaminoglycan binding proteins [BR:
pspa00536
]
121330521
Cytokines and neuropeptides [BR:
pspa04052
]
Cytokines
Growth factors (RTK binding)
121330521
Glycosaminoglycan binding proteins [BR:
pspa00536
]
Heparan sulfate / Heparin
Growth factors/receptors
121330521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
KH_PARP14_8
Motif
Other DBs
NCBI-GeneID:
121330521
NCBI-ProteinID:
XP_041133030
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All DBs
Position
18:12729029..12744700
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AA seq
213 aa
AA seq
DB search
MRTTACYLLISSFYLWFAFAEEAEIPQELIEKLSHSEIRSISDLQRLLEIESVGNEVAAE
SKTRYHKDHVDKHAQILIRRKRSIEEAVPAVCKTRTVIYEIPRSQIDPTSANFLIWPPCV
EVKRCTGCCNTNNMKCQPSRIHHRTVKVAKVEYVRRKPKLKEVLVRLEEHSECMCTSQHY
HTELKEAETGRTRATGLKWKRKKLKHNKDLLPT
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccacagcttgctatttgctaatctcttcgttctacctgtggttcgcctttgct
gaggaagcagagattccccaagaacttattgaaaaactgtctcacagcgaaatccgcagc
ataagcgatctgcagcgcctcctcgagattgaatccgtaggaaatgaggttgctgcagag
tcaaagacgaggtaccacaaggatcatgtggacaagcacgcccagatattaataagaaga
aaacgaagcattgaggaagccgtgcccgcagtgtgcaagacgcggacagtcatctatgag
atccctcgcagccagatcgacccgacttccgccaactttctgatatggccgccttgtgtg
gaggtgaagcgctgcactggctgctgcaacacaaacaatatgaaatgccagccatcgcgg
atacatcacagaacagtgaaggttgcaaaagtggagtatgtgaggagaaaacctaaatta
aaagaagtgctggtgaggttagaagagcactcagaatgcatgtgcacgtcacagcattac
cacacagagctcaaagaagcagaaacaggaaggactagggccacaggtttaaaatggaaa
cgcaaaaagctaaaacacaacaaggatttattaccaacataa
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