Polyodon spathula (Mississippi paddlefish): 121330684
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Entry
121330684 CDS
T07273
Name
(RefSeq) receptor-type tyrosine-protein phosphatase C-like isoform X1
KO
K06478
receptor-type tyrosine-protein phosphatase C [EC:
3.1.3.48
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04514
Cell adhesion molecules
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121330684
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121330684
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121330684
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pspa04090
]
121330684
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121330684
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
121330684
CD molecules [BR:
pspa04090
]
Proteins
121330684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
PTP-SAK
Tc-R-P
DSPc
Y_phosphatase3
PTPlike_phytase
PTP-NADK
SCIMP
Motif
Other DBs
NCBI-GeneID:
121330684
NCBI-ProteinID:
XP_041133332
LinkDB
All DBs
Position
18:24145828..24195793
Genome browser
AA seq
1324 aa
AA seq
DB search
MTSLFGLKLLALCAGLLGSSILCSGNNNEKSTLPLTVKPTLTTLTPAKAGTKYSEPALSP
TLALTTATPSSDSNAVPASPGQGLSAQEPSTSITTHAPTTLATHANTNHTGSQGENYTGT
SLPTNNTKPTGTSSESSNLTSTEDNTNKTTTPALTVTTIASSAFKTRKASECIDREYNIS
EAVYKINISFSTTGNVTVNYSELGSDYIRTEQFDLKPNQIVKIANLTPCTNYTINVTQGN
CQLKGKKHFKTATMDPKIEFKIGKYINDSALELEVNIPSKAKEYTNLTVSCDNCKDNTER
PIKKTVIFADLELCTNYMFYLRGNTTCNTSINEEIQTSVPPGPLDLSVTAKNTSVTLKWK
RSKGLEYRFGCKNTDSTTENVLEQTIKDEETVENLKEFTEYSCYVTSYCNNVSINTSTQK
VTTCGNPGPPTNVEEHIGIRFIKIKWSSPIEKNGNFSFKIQCPNKGKESTQSNSEHLCNN
LNHKDRYDIELFANNNCGNIIYEGTHKKITVNAPKKPTVESRFPENNIIKITCETQGSDA
YYTSRIIEPVETAVEKKRKCEFTYPDLHYLTLYTFEVQVHNDLTSSVPTIYTTSTKYNDK
ALIGFLAFLIVLTSLALAFVLYKIYLLQKKNSDSSDESVELIGRDEEKQLLNVDPITADM
LLDTYKRKMADEGRLFLSEFQSIPRVFSKCAIKEARKNCNLNKNRYVDILPYDYNRVILA
PIDGEAGSEYINASFIDGYKEPRKYIAAQGPKDETMNDFWRMIWEQQSSIIVMVTRCEEG
NRNKCAQYWPAMEREAEIFGEFAVKLNEENKCPDYIIRKLTITNKNMNNSERVVTHIQFT
SWPDHGVPDDPQLLLKLRRRVNSFNNVFSGPIVIHCSAGVGRTGTYIGIDAMIEGLEAEG
RVDVYGYVVRLRRQRCLMVQVEAQYILIHQALLEHNQFGETELALSELHSSLNTLKERDS
PTEPSLLEAEFQRLPTYRNWRLQTVGKHEDNANKNRYSTVVPYDYNRVPIKLEDEMSQDS
DHEEDTEESSDEESDCEDSTKYINASYINGYWSKRSLIATQGPLPNTIADFWHMIFQKKV
KVIAMLTDCKEGDKDYCASYWEDEKKLYGEIEVQVTDCNKASGYTIRAIEIRHTKRKETR
KVYQYYYHMWSGLDLPKSSQELVAVIKSIQQKIPPKSGHDKSKQDKNVPLVVHCNDGSTR
TGIFCALWNLMDSAETEGVVDVFQTVKALRKERPGTLTSFEHYKFLYDVMANTFPAQNGK
VKSSSGQVEDTVEVVNEQKAGVKEQSEGREDGEADDKKESAQSKEPTSNAGKAVESSANG
PTLS
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgactagtctttttggattaaagctcctggcactatgtgccgggctgctgggctccagt
atcctatgctctggtaacaacaatgagaaatccacacttccactcactgtaaaacccact
ctgactacactcacccctgctaaagcaggtactaaatattctgaaccagcccttagcccc
actcttgcactcaccactgcaactccgtcttccgactccaatgctgttcctgcctcgcca
ggtcaaggtctttcagcccaagagccatcaacctctatcaccactcatgcacccaccacc
cttgcaactcatgcaaacaccaaccatactggatcacaaggagaaaattatactggtaca
tctctacccaccaacaataccaaacccacaggcacctcctctgagagttctaatcttaca
agcactgaagacaacacaaacaaaacaacaactcctgcactcactgtcaccacgatagct
tcatcagcctttaaaaccaggaaggcttcagagtgcattgatcgtgaatacaacatttca
gaagctgtatataaaattaacatcagttttagtacaacaggaaatgttactgtgaattat
tcagaattgggatcggattacatcaggaccgaacaatttgatcttaaacccaaccaaata
gttaagattgcaaacctgacaccgtgtactaattatacaatcaatgtcactcaaggaaac
tgccaactgaaaggaaaaaaacattttaaaacagcaacaatggaccccaagattgaattt
aagattggaaagtacattaacgactcagctctagagctagaggttaatatcccaagtaag
gcaaaagaatacacaaaccttacagtaagttgtgataattgcaaagataacacagaaagg
ccaataaaaaagacagttatctttgcggatcttgaattgtgtaccaactacatgttttat
ttaagaggaaacactacgtgtaacacctccatcaatgaagaaattcaaacatcagttcca
ccaggtccactggatctcagtgtcactgcaaaaaacacatctgtgacccttaaatggaaa
agatctaagggtctggaatatagatttggttgtaaaaacacagattccactaccgaaaat
gttcttgaacagactatcaaagatgaagagactgttgagaatctgaaggaatttacagaa
tactcgtgctatgttacatcctactgcaacaatgtatcgattaacacaagcacacaaaaa
gtgacaacttgtggaaatcctggaccaccaaccaatgttgaagaacatattggaataaga
tttattaaaattaaatggtcttcacctatagaaaaaaatggaaatttctcatttaaaatc
cagtgccctaacaaaggcaaagaatctacacagtcaaacagtgaacatttatgtaataat
cttaatcacaaggatagatatgacatagagctttttgcaaacaataactgtggaaatatc
atatatgaaggaacacataagaaaataacagtaaacgctcccaaaaaaccgacggttgaa
tcccgttttccagagaacaatataataaaaataacttgtgaaacacaaggaagtgatgca
tactatacgtcaaggataatcgaaccagttgaaacagccgtggagaaaaaaagaaaatgt
gaattcacttatcctgatcttcactatctaacactgtatacatttgaggtacaagtacat
aatgatcttacctcaagtgttcctacaatatatacgacaagcaccaaatataacgacaaa
gctttgattgggttcctggcattcctcattgttctgacctctttagcccttgcctttgtt
ctatacaaaatctatttgctgcagaagaaaaattcggactcttctgatgaatctgtagag
ctcattggacgtgatgaagaaaagcagcttctcaatgtggaccccatcaccgcagatatg
ttgctggacacttacaaaaggaagatggctgatgaggggagactcttccttagtgaattt
caaagcatcccaagagttttcagcaaatgtgcaataaaagaggcccgcaagaattgtaac
ctgaacaagaaccgctacgttgatatactaccttatgattataatcgagtcattcttgcc
ccaattgatggagaagctgggtcagagtatatcaatgcaagcttcatagatggctacaaa
gaaccaagaaaatacattgctgcccaaggtcccaaggatgagacaatgaatgatttctgg
agaatgatttgggagcagcaatcatccattatcgttatggtgacccgttgtgaggaagga
aacaggaataaatgtgctcaatactggccagctatggagagagaagccgagatctttggg
gagtttgctgtgaagttaaatgaggaaaacaaatgccctgactacatcattcgaaagctc
accatcacaaataagaacatgaacaactcagagcgagttgtgactcacatccagtttacc
agctggcctgaccatggagtccctgacgatcctcagctgcttctgaagttacgccgaaga
gtgaactccttcaacaatgtcttcagtggcccaattgtcattcactgcagtgctggagta
ggtcgtactggtacctatattggcatagatgccatgatagaagggttggaggcagagggg
cgtgtcgatgtttacggctatgtggtaagactccgtcgccagcgctgcctcatggtgcag
gtagaggcccagtacatattgatccaccaggctctgcttgaacacaatcagtttggtgaa
actgagcttgccctctctgaactacattcctctctgaacactttaaaggaacgtgactct
ccaacagagccatcccttctagaggcagaattccagagacttcccacttacagaaactgg
aggttacaaactgtaggaaaacatgaagataatgccaacaaaaatcgctattccactgtt
gttccatatgattataacagagtgcctattaagctggaagatgagatgagccaagacagc
gatcatgaagaagacactgaggagtcctctgacgaagaaagcgattgcgaagactcgacc
aaatacatcaatgcatcttacataaatggctactggagcaaaagatctctgattgctact
cagggaccacttccaaataccattgcagacttctggcacatgatcttccagaagaaagta
aaagtcattgctatgctaacagactgcaaagaaggagacaaggattattgtgcttcatac
tgggaagatgagaagaagttatatggtgagatcgaagttcaggttactgactgcaacaaa
gcttccggctacacaatccgtgctattgaaataaggcacacaaagaggaaagaaacacga
aaagtctaccaatattattatcacatgtggagtgggttggaccttccaaaaagctcacag
gagctggttgctgtgataaaaagcatacaacagaagattccaccaaaatctggccatgat
aaatccaagcaggataagaatgtgccattggttgttcactgcaacgatggctcaacaaga
actgggatattctgtgctctctggaatctcatggacagtgcagaaactgaaggggtggta
gatgtgttccagactgtaaaagctctgcgtaaagaaaggccaggaacactgacatccttt
gaacattacaagttcttgtatgatgtgatggcaaacacctttcctgcccagaacgggaag
gtgaagtcaagctctggccaggtagaggacactgttgaggttgtcaatgaacagaaagca
ggagtgaaggagcagtctgaaggcagagaagacggagaagcagacgacaaaaaggaatct
gcacagtcaaaagaacccaccagtaatgctgggaaagcagtagaaagctctgccaatggc
ccaactctcagttag
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