Polyodon spathula (Mississippi paddlefish): 121331135
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Entry
121331135 CDS
T07273
Name
(RefSeq) lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog
KO
K19363
lipopolysaccharide-induced tumor necrosis factor-alpha factor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121331135
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Motif
Pfam:
zf-LITAF-like
Rubredoxin
Motif
Other DBs
NCBI-GeneID:
121331135
NCBI-ProteinID:
XP_041134281
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Position
18:377457..391639
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AA seq
286 aa
AA seq
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MASAPPLDATTPLTGPVPPSYEDTMKGSYPQYPPNTGYPPQGPKMGEFNQPPYLVQPPHP
GYPPQGPEMGKINQPPYPVQPMQPPVTNQVVSMQTIMVQPGVIFRDQPVQMNCPACQQLI
VTRLEYTSGTLTWLLCGGLAIVGCLYGCCLIPFCIDGAKDVNHWCPNCNRVIGHHRRLYS
HEVTAFLRKMSAPPASTPTTVNVVQVQPPVLFYDRPLQMLCPRCQHSIVTNIVSTAGTMT
YLTCGALFLFGCVFGCCLIPFCVDSLKDSVHTCPNCKNVLGIHKRC
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgcacccccactggatgccaccactcccctgacaggacccgtgcctccttca
tatgaagacacgatgaaggggtcctatccccagtaccctcccaacacagggtaccctccc
cagggaccgaagatgggagaattcaaccagccaccatacctggtacagccaccacaccca
gggtaccctccccagggaccggagatgggaaagatcaaccagccaccatatccagtacag
ccaatgcaaccccccgtaactaaccaagtggtgtcgatgcagacaatcatggtgcagccc
ggcgtgattttcagagaccagcctgtccagatgaactgcccagcctgccagcagctcatt
gtgacccggctggagtatacgtccgggaccctcacctggctgctgtgtggaggacttgcc
atcgtggggtgcctctatggttgctgcctgatcccattctgcatcgatggtgcaaaagac
gtgaatcactggtgtccgaattgcaaccgagtcattggacaccacaggcgcctgtacagc
catgaagtcacagcttttcttcgcaaaatgtctgctccaccagcatccacaccaacgact
gtgaatgtcgtacaagtgcagcctccggttctgttctatgacagaccgctccagatgctt
tgtcccagatgccagcactcgattgtgaccaacatagtgtccactgctgggacaatgacg
taccttacatgcggagcgcttttcctttttgggtgtgtcttcggctgctgtctgattccc
ttctgtgtggacagtctgaaggactccgttcacacctgtccaaactgcaagaacgttctt
ggcattcacaaacgttgctga
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