Polyodon spathula (Mississippi paddlefish): 121331145
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Entry
121331145 CDS
T07273
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00514
Other types of O-glycan biosynthesis
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
121331145
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121331145
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pspa01003
]
121331145
Enzymes [BR:
pspa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
121331145
Glycosyltransferases [BR:
pspa01003
]
Glycan extension
O-Glycan
121331145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
DUF2785
Motif
Other DBs
NCBI-GeneID:
121331145
NCBI-ProteinID:
XP_041134290
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Position
18:3051753..3078423
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AA seq
629 aa
AA seq
DB search
MLKTCGKRFLLSIVGATFTCLAVLLVAQLQQRSQVEAVPNGREVGMRSLQSLEDLAESHN
TQEPQRSQLDLQQQASNPEQGKGFSAYFTKLTRDRREAEKTESNPQSATEKPPMEDITPN
DVFIAVKTTKKFHQARLALLLDTWISRNVQQTYIFTDGEDEELKKRIGSHAINTNCSAAH
SRQALSCKMAVEYDKYIESGKKWFCHVDDDNYVNMQTLVKLLSNYPHTQDIYIGKPSLDR
PIEATERLVDIPQEICSSHEVLIVAHLCLTIALDARRQQHVSFLRRSAPAELLFYLLSTF
LAQLQQRSQVEAVPNGREVGMRSLQSLEDLAESHNTQEPQRSQLDLQQQASNPEQGKGFS
AYFTKLTRDRREAEKTESNPQSATEKPPYLLFLQTYIFTDGEDEELKKRIGSHAINTNCS
AAHSRQALSCKMAVEYDKYIESGKKWFCHVDDDNYVNMQTLVKLLSNYPHTQDIYIGKPS
LDRPIEATERLGDNLMRPVNFWFATGGAGFCISRGLALKMSPWASGGHFMNTAEKIRLPD
DCTIGYIIESVLGVKLIRSNQFHSHLENLQQVPKSELHKQVTLSYGMFENKRNAINMKGA
FPVEEDPSRFKSVHCLLYPDTPWCPSYVV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaacttgcggtaagaggtttttgctctccatcgttggagctaccttcacctgc
ctggctgttctgttagtggctcagctgcagcagcgaagccaggtagaggccgtcccaaac
gggagagaggtggggatgcgctcgctgcagagcttggaggacctagccgagagtcacaac
acacaggagccacaacggagccagctcgaccttcagcagcaggcttccaacccggagcaa
gggaaaggcttctcggcttatttcaccaaactgacccgggacaggagggaagcagagaag
acagaaagcaaccctcagtctgcgaccgagaaaccgcctatggaagacatcacaccgaat
gatgttttcatcgcagtcaagaccacgaagaagtttcaccaagcccgactggcgctgctt
ttagatacctggatctcaagaaacgtgcaacagacttacatcttcacagatggagaggac
gaggagctaaagaaaagaataggaagccatgccattaacacaaactgctcagcagcacac
agccgacaagctctgtcctgcaagatggcagtggagtatgacaagtatattgaatctggg
aaaaaatggttctgccatgtggatgatgacaactacgtgaacatgcagactctggtgaaa
ctgctctccaactacccccacactcaggatatctacattgggaagccgagcctggaccgg
cccatcgaagccacggagagactcgttgacataccccaagagatttgcagctctcatgaa
gtcctcatcgtagcacacctatgtttaaccattgcactggatgccaggagacagcagcat
gtgtcctttctgaggcggagtgcgccagcagagctccttttctacctcctgtccacattc
ttggctcagctgcagcagcgaagccaggtagaggccgtcccaaacgggagagaggtgggg
atgcgctcgctgcagagcttggaggacctagccgagagtcacaacacacaggagccacaa
cggagccagctcgaccttcagcagcaggcttccaacccggagcaagggaaaggcttctcg
gcttatttcaccaaactgacccgggacaggagggaagcagagaagacagaaagcaaccct
cagtctgcgaccgagaaaccgccttaccttctgttcttgcagacttacatcttcacagat
ggagaggacgaggagctaaagaaaagaataggaagccatgccattaacacaaactgctca
gcagcacacagccgacaagctctgtcctgcaagatggcagtggagtatgacaagtatatt
gaatctgggaaaaaatggttctgccatgtggatgatgacaactacgtgaacatgcagact
ctggtgaaactgctctccaactacccccacactcaggatatctacattgggaagccgagc
ctggaccggcccatcgaagccacggagagactcggagacaacttaatgcggccagtaaac
ttttggtttgctactggaggtgctgggttctgtatcagccgtggtctggcattgaagatg
agcccatgggcaagcggaggacacttcatgaacacagcagagaaaatccgtctccctgac
gactgcacgatcggctacatcatcgagtctgtgctgggagtcaaactgatccgcagcaac
cagttccactcccacctggagaacctgcagcaggtgcccaagtctgaactccacaagcag
gtgacattgagctatggaatgtttgaaaacaagaggaatgccattaacatgaagggggct
ttccctgtggaggaggacccatccaggttcaagtctgtacactgtttgctgtacccagac
accccctggtgcccctcttatgttgtctaa
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