Pseudogemmatithrix spongiicola: Strain318_000361
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Entry
Strain318_000361 CDS
T10301
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc00270
Cysteine and methionine metabolism
pspc00450
Selenocompound metabolism
pspc00670
One carbon pool by folate
pspc01100
Metabolic pathways
pspc01110
Biosynthesis of secondary metabolites
pspc01230
Biosynthesis of amino acids
pspc04980
Cobalamin transport and metabolism
pspc04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Strain318_000361 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Strain318_000361 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Strain318_000361 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Strain318_000361 (metH)
04980 Cobalamin transport and metabolism
Strain318_000361 (metH)
Enzymes [BR:
pspc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
Strain318_000361 (metH)
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
WKW14036
UniProt:
A0AA49Q3Q6
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All DBs
Position
complement(399706..403410)
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AA seq
1234 aa
AA seq
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MSTFTRASRIEALHAEAKHRLLIIDGAMGTMVQTYGLTEKDYRGSRFADWSRDLKGNNDL
LILTRPDVVGGIHRAYLEAGADIIETATFNSTRISMADYGMQEIVRELNTEGARLVRHLC
DEFEAKDGRPRWTAGVLGPLNRTASLSPDVNDPGARNITFAEMVEAYAESTQGLLDGGTD
IILIETIFDTLNAKAAIFAVERVFDERGERVPVMISGTITDASGRTLTGQTTEAFWNSVM
HAKPFSVGLNCALGAKDLRGYVQELARVADCYVTVHPNAGLPNEMGGYDETPAYTSSILK
EFAESGLVNVVGGCCGTTPAHIKAIAEAVKGLPPRTIPEIPKRLRLSGLEPLVIGPDSNF
VNVGERTNVTGSKKFAELIIGNRYDEALEVARQQVEAGAVIIDINMDEGMLDAEAAMTRF
LNLVASEPGISKVPIMLDSSKFSVIEAGLRCVQGKGIVNSISLKEGEAEFIRQATLVRRY
GAAVIVMAFDEQGQADTVERKVSISERAYKILTERVGFPPEDIIFDPNIFAIATGIEEHN
RYALDFIEATGLIKQRCPHARISGGVSNVSFSFRGNNPVREAIHSVFLYHAVKAGMDMGI
VNAGALVLYEDIPADLRERVEDVVLARRADATERLLAVADQAKGQSQAKKADLTWRQGPV
HERLSHALVHGIADFVVEDTEEARHLFDRPIEVIEGPLMQGMNVVGDLFGAGKMFLPQVV
KSARVMKRAVAHLIPYIEAEKALNPESRAKGKVVMATVKGDVHDIGKNIVGVVMQCNNFE
VVDLGVMVPCAKILEAAREHNADMIGLSGLITPSLEEMAFVASEMQREGWTIPLLIGGAT
TSKVHTAVKIAPNYTGPVVHVLDASRAVGVASSLTSDGLKDQFVREVADEYEAVRKHRAA
RQKDQKRQTIAEARANKPKLTWTGDAPAPSFEGVRVFDEFPLEELVPRIDWTPFFQTWEL
AGSYPAILEDKVVGEAARNLWNDAQAMLEKIVDEKWLRARAVVGFFPAWSDGEEQIYVER
GTVKGEGRETVTIQTIRQQMVKNDGRPNYALADFVAPKSAGVRDYLGGFVVTTGIGLDAK
VAEFEAANDDYNSIMVKALADRLAEAFAERLHEKVRRELWGYAPNEHLDNQALIREQYQG
IRPAPGYPACPDHTEKRTLFDLLDAENLSGVHLTESFAMQPASAVSGWYFWHPEAQYFGV
GKIEKDQVEAYAARKGVSQAEAERWLAPILNYDR
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgttcacccgcgcctctcgcatcgaggccctccacgccgaagccaagcatcgc
ctgctgatcatcgatggcgcgatgggcacgatggtgcagacctacgggctcaccgagaag
gattaccgcggctcgcgcttcgccgactggtcgcgcgacctcaagggcaacaacgacctg
ctgatcctcacgcggcctgatgtggtcggcggcatccaccgcgcctacctcgaagccggc
gctgatatcatcgagacggcgacgttcaactcgacgcgcatctcgatggccgactacggc
atgcaggagatcgtgcgcgagctcaacacggaaggcgcacggttagtgcgccatctatgt
gatgagttcgaggccaaggacggacgcccccgctggaccgccggcgtgctcggccccctc
aatcgcaccgcctcgctctcgccggacgtcaacgaccccggcgcgcgcaacatcaccttc
gccgagatggtggaggcctacgccgagtccacgcagggcctgctggacggcggcaccgac
atcatcctgatcgaaacgatcttcgacacgctgaacgccaaagcggcgatcttcgccgtc
gaacgcgtgttcgacgaacgcggcgagcgtgtgccggtgatgatctccggcaccatcacc
gacgcctcgggccgcacactcaccggccagaccaccgaggccttctggaactcggtgatg
cacgccaagcccttcagcgtgggcctcaactgcgcgctcggcgccaaggacctgcgcgga
tacgtacaggagctcgcgcgcgtcgccgactgctacgtgacggtgcatccgaacgccggc
ctgccgaacgagatgggcggctacgacgagacgccggcctacacctcgtcgattctgaag
gagttcgccgagagcggcctcgtgaacgtggtcggcggctgctgcggcacgacgccggcg
catatcaaggcgatcgccgaggcggtgaagggcctgccgccgcgcacgattcccgagatt
ccgaagcgcctgcgcctctcgggtctcgagcccctggtcatcggccccgactcgaacttc
gtgaacgtcggcgagcgcacgaacgtcacgggttccaagaagttcgccgagctgatcatc
ggcaatcgctacgacgaggcgctcgaggtcgcgcgccagcaggtcgaggcgggcgcggtg
atcatcgacatcaacatggatgagggcatgctcgacgccgaggcggcgatgacgcgcttc
ctcaacctcgtggcgtcggagccgggcatctcgaaggtgccgatcatgctcgacagctcg
aagttcagcgtcatcgaggccggcctgcgctgcgtgcaaggcaagggcatcgtgaactcg
atctcgctgaaggaaggcgaagccgagttcatccgccaggcgacgctggtgcgccgctac
ggcgcggccgtgatcgtcatggccttcgacgagcaggggcaggcggacacggtcgagcgc
aaggtcagcatcagcgagcgcgcatacaagatcctcaccgagcgcgtgggcttcccgcct
gaagacatcatcttcgacccgaacatcttcgcgatcgccacgggcatcgaagagcacaac
cgctacgcgctggacttcatcgaagccacggggctgatcaagcagcgctgcccgcacgcg
cgcatctccggcggcgtcagcaacgtctcgttctcgttccgcggcaacaacccggtgcgc
gaggccatccactcggtgttcctgtaccacgccgtgaaggcgggcatggacatgggcatc
gtgaatgccggcgcgctggtgctctacgaggacatcccggccgacctgcgcgagcgcgtc
gaggacgtggtgttggctcgccgcgccgacgccaccgaacgcctgctggccgtcgccgac
caagccaaggggcagtcgcaggccaagaaggcggatctcacctggcgccaagggccggtg
cacgagcgcctctcgcacgcgctggtgcacggcatcgcggatttcgtcgtcgaggacacc
gaggaagcccgccacctcttcgaccgccccatcgaggtcatcgaaggcccgctgatgcag
ggcatgaacgtcgtcggcgacctcttcggcgccggcaagatgttcttgccgcaggtggtc
aagtcggcccgcgtgatgaagcgcgcggtcgcgcacctgattccttacatcgaagccgag
aaggcgctcaacccggagtcacgggccaagggcaaggtcgtgatggccacggtcaagggc
gacgtgcacgacatcggcaagaacatcgtgggcgtcgtcatgcagtgcaacaacttcgag
gtcgtggacctcggcgtcatggtgccctgcgcgaagatcctcgaagcggcgcgcgagcac
aacgcggacatgatcggcctctccggcctgatcacgccttcgctcgaagagatggccttc
gtcgccagcgaaatgcagcgcgagggctggacgattccgctgctcatcggcggcgcgacg
acatccaaggtgcacacggccgtgaagatcgcgccgaactacacgggcccggtggtgcac
gtactcgacgcctcgcgtgcggtgggggtggccagctcgctgacgagcgacggcttgaag
gaccagttcgtgcgcgaagtcgccgacgagtacgaggccgtgcgcaagcatcgcgcggcg
cgacagaaggaccagaagcggcagacgatcgccgaggcgcgggccaacaagccgaagctc
acctggactggggacgccccggcgccgtctttcgaaggcgtgcgcgtctttgacgaattc
ccgctcgaagagctcgtgccgcgcatcgactggacgccgttcttccagacttgggagctg
gcgggctcgtatccggcgatcctcgaggacaaggtcgtcggcgaagccgcgcgcaaccta
tggaacgacgcgcaggccatgctcgagaagatcgtcgacgagaagtggctgcgcgcgcgg
gccgtcgtcggcttcttcccggcgtggtcggatggcgaagagcagatctacgtcgaacga
ggaacggtgaagggggaagggcgtgagaccgtcacgatccagaccattcgccagcagatg
gtgaagaacgacgggcgtccgaactacgccctcgccgacttcgtggcgccgaagtccgcc
ggcgtgcgcgactacctcggcggcttcgtggtcaccacgggcatcgggctcgatgccaag
gtcgctgagttcgaggcggcgaatgacgactacaactccatcatggtgaaggcgctggcc
gaccgtctggccgaggccttcgccgagcggcttcacgagaaggtgcggcgcgagttgtgg
ggctacgcgccgaacgagcatctcgacaaccaggcgctgatcagggagcagtaccaaggc
attcgccccgcgccggggtatccggcctgcccggaccacacggagaagcgcacgctgttc
gacctgctcgacgccgagaatctctcgggcgtgcatctcaccgagagctttgccatgcag
ccggcctcggcggtgagcggctggtacttctggcatcccgaggcgcagtacttcggcgtc
gggaagatcgagaaggatcaagtcgaggcgtatgcggcgcggaagggcgtgtcgcaggca
gaggcggagcgttggttggcgccgatcctcaactacgaccgctga
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