Pseudogemmatithrix spongiicola: Strain318_000383
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Entry
Strain318_000383 CDS
T10301
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc01501
beta-Lactam resistance
pspc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Strain318_000383
01503 Cationic antimicrobial peptide (CAMP) resistance
Strain318_000383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspc03036
]
Strain318_000383
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspc02000
]
Strain318_000383
01504 Antimicrobial resistance genes [BR:
pspc01504
]
Strain318_000383
Chromosome and associated proteins [BR:
pspc03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Strain318_000383
Transporters [BR:
pspc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Strain318_000383
Antimicrobial resistance genes [BR:
pspc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Strain318_000383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_CzcB
Beta-barrel_RND_2
BSH_RND
BSH_CusB
YknX_C
BSH_YhbJ
Biotin_lipoyl
BSH_Fcp1
HH_EMRA
HH_CzcB
BSH_YknX
Beta-barrel_YknX
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
WKW14058
UniProt:
A0AA49JT29
LinkDB
All DBs
Position
424892..425938
Genome browser
AA seq
348 aa
AA seq
DB search
MTARLSLLLVLIALTACGRDAELGSESAAPIPVRVVQPQPRSAEPDIQLTGMLGAKEEIP
LGFKIGGVVASVGVEAGDRVTEGQLLAALSPVEIESSVSAAREGRDKARRDLARVERLQR
DSVTTLAQLEDARTGLEVAEAQLRAAEFNRQYAEVRAPAAGVILRKQLERGQLVAPGAPV
FLLRAERTGLVLRAGAADRDAVRLSTGMRARVEFDAYPGVVFDGRIEQVGVAAAPMTGTY
EVEIAVEPAGRRLASGLIGRARVTPQSAAPVLTLPAEALLEVEGREATVFVLDAAESAAQ
RKRVTVLWLDGPFAAVSGEIAADARVVIAGASRLADGTRVHVVTERTP
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgctcgcctttcgcttctcctcgtcctcatcgcgctcaccgcgtgcggaagggac
gccgagctcgggtccgaatccgcggcgcccatccccgtgcgcgtcgtccagccccagccg
cgcagcgcggagccagacatccagctcaccggcatgcttggggccaaggaagagattccg
ctcggcttcaagatcggcggcgttgtcgccagcgtcggcgtcgaggccggtgaccgcgtc
accgaaggccaactgctcgcggcgctctcgccggtggagatcgagtcctcggtgtctgcc
gcgcgcgaagggcgcgacaaggcgcgtcgcgatctcgcgcgcgtcgagcgcctgcagcgc
gacagcgtgactacgctggcccaactcgaagacgcgcgcacgggactcgaagtcgccgag
gcgcaactgcgtgcggcggaattcaaccggcagtacgccgaggtgcgcgcacccgcggcg
ggcgtgatcctgcgcaagcagcttgagcgcgggcagctggtggcgccgggcgccccggtg
ttcctgttgcgcgccgagcgcaccgggctcgtgctgcgcgccggagctgcagatcgcgac
gccgtgcggctctccaccggcatgcgcgcgcgcgtggagttcgatgcgtaccccggcgtc
gtcttcgacggccgcatcgagcaggtgggcgtcgcagcggcgccgatgacgggcacgtac
gaagtggagatcgccgtcgaacccgccggacgccggctggcctcggggctcatcggccgc
gcgcgcgtgacgccgcagagcgcggcacccgtcctgacgcttccggcggaagcgctgctc
gaggtcgagggacgcgaggccacggtgtttgtgctcgatgcggcggaaagcgccgcgcag
cgcaagcgcgtcaccgtgctctggctcgacgggcccttcgcggccgtcagcggagagatt
gcggctgacgcgcgcgtcgtgatcgctggcgcgagccgactcgccgacggaacgcgggtg
catgtcgtgaccgagcgtaccccgtga
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