Pseudogemmatithrix spongiicola: Strain318_002805
Help
Entry
Strain318_002805 CDS
T10301
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc01501
beta-Lactam resistance
pspc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Strain318_002805
01503 Cationic antimicrobial peptide (CAMP) resistance
Strain318_002805
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspc02000
]
Strain318_002805
01504 Antimicrobial resistance genes [BR:
pspc01504
]
Strain318_002805
Transporters [BR:
pspc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Strain318_002805
Antimicrobial resistance genes [BR:
pspc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Strain318_002805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
WKW16390
UniProt:
A0AA49K1U6
LinkDB
All DBs
Position
complement(3072986..3076144)
Genome browser
AA seq
1052 aa
AA seq
DB search
MFISDFAIKRPLVTVVSMLALVVFGLFSLWQLETDEFPDVQQPIINVAIPYPGASPDVVE
REVLDRVEEAVSGISGVDRISGAAQDGFANVTVFFVFEKDLQQASQDIRDKISAIRSELP
VEMKEPVLTRFDPADQPIIEMSLNSSTLDAPALTRIADPGITRILRGIPGVAEANVIGGV
ERELTVEIRPEAMEAAGISVAQLVGALQSQNLAAPVGRITGALDERSIRLKGKLETPEDF
LQLVVAEKGGRAIRLGEVATARDGTAEPRTAAMFNGRDAIGIQVKKSKGYSTTAVAERVV
AAIDELRPGLPTGTTLDVVRNSGERVEASVANVQSTLVEGAVLTVLVVFLFLNSWRSTVI
TGLALPISVLASFVAVWAFGFTLNTMSLLGLSLAIGILIDDAIVVRENIVRHVEMGKDHF
RAAHEGTDEIGLAVAATTFSIVAVFVPIGFMAGLSGQWFKPFALTIACAVLVSLFVSFSL
DPMLSAYWPDPEIENHEHRSWISRQLVKFNNWFDRMAGGYTKVIGWALDHRLAMILLAVG
SLVGALALQATIGGFGFVPVSDNSELIIQVETPPGSNLEYTRMKTEEAAQVARKHGEVRY
TFATIGAGGGLDPSEALGAVDLGSVYVRMTPKATREISQEQLGAILREDVKTIGGATVAV
FTSGFGGAIKQVQLELRGFDGRQLQAFADSVLKVVRAVPGAVDVSLSTKGQKPELEITLD
RALAGSLGVSVGQIAQSLRPAFAGIDAGDWVDPAGENRKVRVRLAPESRTKVSDIERLPI
AVGGQGGAPMRMMPLGQLATVTQGLGPAKISHLDRDNVVVVQGNVSGRSLGEVTSDITRE
LQRMQVPDGIRWSFGGEAKDQAQVFGDILAALGIALLLMYLILVMQFGSFLEPIAILISL
PLSLIGVVLALIITNDTLNIMSMIGVILLMGIVAKNAILLIDFAKWGQEQGMERRAAIIE
AGRVRLRPILMTTFALIAGMIPVALGLGEGADFRAPLGRAVIGGTITSTVLTLLVIPTIY
EIMDEWREKVSGWFKFPVRPKTEEFMIPTKTS
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgttcatctcagactttgcgatcaagcggccgctggtcaccgtcgtgtcgatgctggca
ctggtggtgttcgggctgttctcgctctggcagctggagacggacgagttcccggacgtc
cagcagccgatcatcaacgtcgcgattccgtatccgggcgcctcgcctgacgtcgtcgag
cgcgaagtgctcgaccgcgtcgaggaggcggtgagcggcatctcgggcgtggaccgcatc
agcggcgcggcgcaggacggcttcgccaacgtcacggtgttcttcgtgttcgagaaggac
ctgcagcaggcctcgcaggacatccgcgacaagatcagcgccatccgctccgagctcccg
gtggaaatgaaggagccggtgctcacgcgcttcgaccccgcggaccagccgatcatcgag
atgtcgctcaactcgagcacgctcgacgcgccggcgctcacgcgcatcgccgatcctggc
atcacgcgcatcctgcgcggcatcccgggcgtcgcggaagcgaacgtcatcggcggcgtg
gagcgcgagctcaccgtcgagatccgtcccgaggcgatggaggcggcgggcatctccgtg
gcccagctcgtcggcgcgctgcagtcgcagaacctcgcggcgccggtcggccgcatcacc
ggcgcgctcgacgagcgctcgatccgcctcaagggcaagctcgagacgccggaagacttc
ctgcagttggtggtcgccgagaagggtggtcgcgccatccgcctcggcgaagtcgccacc
gcgcgcgacggcacggccgagccgcgcacggcggcgatgttcaacggccgcgatgccatc
ggcatccaggtgaagaagtcgaagggctattcgacgacggcggtggccgagcgcgtggtc
gcggcaatcgatgaactgcgcccgggcctgccgacgggcaccacgctggacgtggtgcgc
aactccggcgagcgcgtcgaggcgtcggtggccaacgtgcagagcacgctggtcgaaggc
gcggtgctgacggtgctcgtggtgttcctgttcctgaattcctggcgctcgacggtgatc
accggcctcgcgctgccgatctccgtgctcgccagcttcgtggccgtgtgggccttcggc
ttcacgctcaacacgatgtcgctgctcggcctctcgctggccatcggcatcctgatcgac
gacgccatcgtggtgcgcgagaacatcgtgcgacacgtggagatggggaaagaccatttc
cgggcggcgcacgagggcaccgacgaaatcggcctcgccgtcgccgcgacgacgttctcg
atcgtcgcggtgttcgtgccgatcggcttcatggccggtctgtcgggccagtggttcaag
cccttcgcgttgaccatcgcctgcgcggtgctcgtgtcgctgttcgtgtcattctcgctc
gacccgatgctctcggcgtactggccggacccggagatcgagaaccacgagcaccgcagc
tggatctcgcggcagctcgtgaagttcaacaattggttcgaccgcatggccggcgggtac
accaaggtcatcggctgggcgctggaccatcgtctcgcgatgatcctgctcgccgtcggc
tcgctcgtgggcgcgctcgcgctgcaggcgacgatcggcgggttcggcttcgtgccggtg
agcgacaactcggagctcatcatccaggtggagacgccgccggggtcgaacctcgagtac
acgcggatgaagacggaggaggccgcgcaggtggcgcgcaagcacggcgaggtgcgctac
acgttcgcgacgatcggcgcgggcggcggcctggatccgtcggaagcgctcggggccgtg
gacctgggctccgtgtatgtacgcatgacacccaaggccacgcgcgagatctcgcaggag
cagctcggcgcgatcctgcgtgaggacgtgaagacgatcggcggcgcgacggtggccgtg
ttcacctcgggcttcggtggtgcgatcaagcaggtgcagctcgagctgcgcggcttcgac
ggccgccagctgcaggcgttcgccgactcggtgctcaaggtggtgcgcgccgtgccgggc
gcggtggacgtgtcgctctcgaccaagggccagaagcccgagctcgagatcacgctcgac
cgcgcgctggccggttcgctgggcgtgagcgtggggcagatcgcccagtcgctgcgtccg
gccttcgcgggcatcgacgccggcgactgggtcgacccggcgggcgagaaccgcaaggtg
cgcgtgcgcctcgcgccggagtcgcgcaccaaggtgagcgacatcgagcgcctgccgatc
gccgtgggtggccagggcggtgcgccgatgcgcatgatgccgctggggcagctggcgacg
gtcacgcagggcttgggaccggcgaagatctcgcacctcgaccgcgacaacgtggtcgtc
gtgcagggcaacgtctccggccgttcgctcggcgaagtcaccagcgacatcacgcgtgaa
ctgcagcgcatgcaggtgccggacggcatccgttggagcttcggcggcgaggcgaaggac
caggcgcaggtcttcggcgacatcctggcggcgctgggcatcgcgctgctgctgatgtac
ctgatcctcgtgatgcagttcggctcgttcctcgagccgatcgccatcctcatctcgctg
ccgctgtcgctgatcggcgtggtgctggcgctgatcatcacgaacgacacgctgaacatc
atgtcgatgatcggcgtgatcctgctgatgggcatcgtggcgaagaacgccatcctgctc
atcgacttcgcgaagtgggggcaggagcagggcatggagcgccgcgcggcgatcatcgag
gcggggcgcgtgcgcctgcggccgatcctgatgacgaccttcgcactcatcgccggcatg
atccccgtggcgctgggcctcggcgaaggcgcggacttccgggctccgttggggcgtgcg
gtcatcggtggaaccatcacgtccacggtcctgacgctgcttgtgatcccgacgatctac
gagatcatggacgagtggcgcgagaaggtgtcggggtggttcaagttcccggtgcggccg
aagaccgaggagttcatgattccgaccaagacctcgtaa
DBGET
integrated database retrieval system
