Paenibacillus spongiae: L1F29_14625
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Entry
L1F29_14625 CDS
T09530
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pspn
Paenibacillus spongiae
Pathway
pspn00300
Lysine biosynthesis
pspn00550
Peptidoglycan biosynthesis
pspn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
L1F29_14625
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
L1F29_14625
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pspn01011
]
L1F29_14625
Enzymes [BR:
pspn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
L1F29_14625
Peptidoglycan biosynthesis and degradation proteins [BR:
pspn01011
]
Precursor biosynthesis
Amino acid ligase
L1F29_14625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
UVI32987
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Position
3197532..3198785
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AA seq
417 aa
AA seq
DB search
MRLKELADLLTIAELQGEMDIGITGIRMNSQHVRQGDLFICIPGIPGFQEDRHQYAADAV
RRGAVALVVEQEVGLDMPTIRVPDARYAMALFAAHLNGYPSHGLQLIGVTGTNGKTTTCH
MIESIFIHAGHPTGLMGNLGTRIGTTLMETEINTQEPPELQANLKRMTDARVKYCFMEVS
SQGLHMGRVLGCEFRTAVFTNLTQDHLDYHGSMDNYMAAKGLLFARLAQSFVPDPAKRKY
AVLNADEEASAVFRKLTAAQVLTYGIRNQADVMAKNIRLTSQGTSFDLVSYAGTVTIQLR
LVGTFNVYNALGFILLGYRVPTIAKQKHPMEPHAFHGSLRCLVGGLLRDPNLHHQKSILI
EVQSIRRNLMVHSKVPTTYILIVSLASVFTLMDDSISITAGYSVDHTTECFEIRNGI
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcggttaaaggagcttgcggatttattgacgatcgcggaattacaaggcgaaatggat
atcggcataacgggcattcgtatgaattctcagcatgtacggcaaggcgatttgttcata
tgcattcccggtattccaggatttcaggaggaccgtcaccaatacgcggcggatgcagtg
agaagaggggcagtcgccttggttgtcgagcaggaggtcggattggatatgccaaccatt
cgggtgccggacgcccgttatgccatggcgctcttcgccgcgcatttgaacggttatccg
agtcatggtcttcagctgatcggagtaacgggaacgaacgggaagacgacaacgtgtcac
atgattgaatccatcttcattcatgcgggccaccctacgggattaatgggtaatctcgga
acgaggatcggcacgacccttatggagaccgaaatcaatacccaggagccgccggaactg
caagcgaacttgaaacgaatgactgatgcccgggtgaaatattgcttcatggaggtaagt
tcgcagggcttacatatgggacgcgtattgggctgtgaattcagaaccgccgtattcacg
aatttaacgcaggatcatcttgactatcatggttcgatggacaattatatggcggctaaa
ggattgctcttcgcaagacttgcgcaatccttcgtgccggatccggccaagcgcaaatac
gccgttcttaatgcggatgaagaagcttcggccgtatttaggaagcttacagccgctcag
gtgctgacgtacggcatacgaaatcaggccgacgtgatggcgaagaacatccgattaact
tcgcaaggcacttcctttgacttggtatcctacgccggaacggtaacgatccaattaagg
ctggtcgggaccttcaatgtgtataatgcgctgggttttatacttctcggctaccgggta
cccacgattgcaaagcaaaaacacccaatggaaccgcatgcctttcacggttcgcttagg
tgtttagtgggtggtctactgagggatccaaatcttcatcatcaaaaaagcatcttaatt
gaggtccagtcaataagacgcaatttgatggttcatagcaaggtccctacgacgtatatc
ctcattgtctcgcttgcttcagtcttcactctcatggacgactccataagcattactgca
gggtattcagtcgatcatactacagaatgttttgaaatcaggaacggaatttaa
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