Paenibacillus spongiae: L1F29_20345
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Entry
L1F29_20345 CDS
T09530
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pspn
Paenibacillus spongiae
Pathway
pspn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L1F29_20345 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspn03400
]
L1F29_20345 (nth)
Enzymes [BR:
pspn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
L1F29_20345 (nth)
DNA repair and recombination proteins [BR:
pspn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
L1F29_20345 (nth)
Prokaryotic type
L1F29_20345 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
CEP63
Motif
Other DBs
NCBI-ProteinID:
UVI33700
LinkDB
All DBs
Position
complement(4512350..4513027)
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AA seq
225 aa
AA seq
DB search
MSHILRVIGEMFPDAHCELIHDNPFELTIAVLLSAQCTDETVNKVTATLFKKYRSPADYL
AVPQEELEQDIRRIGLFRTKAANIQKLCRILIDEYEGQIPRAHEELVKLPGVGRKTANVV
VSNAFGVPAIAVDTHLDRVSKRLGIAKPEDSVLEVEKKLMKLVPREQWTDTHHRLIFFGR
YHCKAQNPACPVCPLLDVCKDGQKRMKPATRPTSKENKTKLNGKG
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatattttgcgagtcatcggcgagatgtttccggatgctcattgcgaattgatt
cacgacaacccgttcgagctgacgatagccgtgctgttgtccgcgcaatgcaccgacgaa
accgtgaacaaggtaacggctactttgtttaagaagtaccgttcgccagctgattatttg
gcggttccgcaggaagagctcgagcaagatatccggcgcataggactgttccgcaccaaa
gcggcgaacattcaaaagctgtgccgcatactcattgatgaatatgaaggccaaattcca
cgcgcgcacgaggagcttgtcaagctgcccggtgtcggccgcaagacggccaacgtcgtc
gtatcgaacgcattcggtgtgccggccattgcggttgatacgcatttggatcgcgtctcg
aaacgacttggcatcgccaaaccggaagacagcgtgctcgaagtagagaagaagctaatg
aagctcgtcccgagagagcaatggaccgatacgcaccatcgtcttatttttttcgggcgt
tatcactgcaaagctcaaaaccccgcttgcccggtctgtcctttgctcgatgtgtgcaag
gatggccagaagcgaatgaagccggcgacaaggccgacaagtaaagaaaacaaaaccaaa
ttaaacggtaaaggatga
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