Pseudoalteromonas sp. PS1M3: PS1M3_36530
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Entry
PS1M3_36530 CDS
T11044
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
psps Pseudoalteromonas sp. PS1M3
Pathway
psps01501
beta-Lactam resistance
psps01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psps00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PS1M3_36530
01503 Cationic antimicrobial peptide (CAMP) resistance
PS1M3_36530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psps02000
]
PS1M3_36530
01504 Antimicrobial resistance genes [BR:
psps01504
]
PS1M3_36530
Transporters [BR:
psps02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PS1M3_36530
Antimicrobial resistance genes [BR:
psps01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PS1M3_36530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
BBW93566
LinkDB
All DBs
Position
2:403713..406844
Genome browser
AA seq
1043 aa
AA seq
DB search
MSRFFIDRPIFAWVLAIVVMLAGILAIKSLPIAQYPSIAPPAISITATYPGASARTLEDT
VTQVIEQKMKGLDGLLYMSSTSESSGSATLTLSFSAETDPDIAQVQVQNKLATATPLLPE
AVQRQGVVVAKSARNFLMVYAFMSKDGSMTNIDIGDYVSSNVQDIVSRVEGVGEVQLFGS
QYAMRIWLDPAKLQNYKLTPADISASISAQNAQVSAGQLGAMPAVAGQQLNATVTAQSRL
QTPEQFRDILVKTNADGSFVKLSDVARVELGGESYRVVARYDGKPASGLGIKLASGANAL
DTAQGVKDAIAELEPFFPEGLEAVVPYDTTPFVALSIEKVIHTLIEAVVLVFVVMYLFLQ
NFRATLIPTIAVPVVLLGTFGILYTFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERLM
TEEKLSALDATRKSMDEIKGALVGIAMVLSAVFIPMAFFSGSTGIIYRQFSITLVSAMGL
SVLVALILTPALCATLLKPSHVHNDKSLFGKFFTGFNRGFDKTNSGAQSFVSRMIKHAKR
YLVIYFLIVGGMAYVFSNLPTAFLPDEDQGILFNQVSLPAGSTTEQTLEVVKKVENHYLN
EQSEAVNGIFTVTGFSFAGSGQNSAIGFVNLKHWDERQRDDLSVQGVAGKAMGYFSSIKE
AFVFAFPPPAIVELGTANGFNIFLQDRVGLGHDALLAARNQLLGLASQSPILAGVRPNGQ
EDMPEIQLDTDLAKAQALGVSQTDINNTLATAWGSSYVNDFIDRGRVKKVYMQGDAESRM
VPEDLNKWYVRNNEGDMVPFSAFATAYWTYGSPRLERYNGFSAMEIQGTAAPGYSTGQAM
DEMERLVKQLPNGISSEWTGISFQERSSSGQAPLLYGLSLLFVFLCLAALYESWSVPFAV
MMIVPLGIFGAAMAALGSGLSNDIYLQVGLLTTIGLASKNAILIVEFAIHKMDEGLDLVE
AAVAAVRLRLRPILMTSMAFICGVIPLAIASSAGSGAQNALGISIIGGTLASSILVVVFV
PLFFVLVRRVFPAKEKNTNEETA
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgattttttatcgatagacctatatttgcttgggtacttgccatagtagtgatg
ctagcaggtatattagcaattaaaagtttacctattgcgcagtatccgtctatagcgccg
ccagcaataagtattacggctacctacccaggtgcatcggcgcgtacgctcgaagatact
gttacacaagttatagagcaaaaaatgaaaggcttagatggcttgttatacatgtcgtca
acgtcagagtctagcggttcagcaacgctcacactgtcgtttagcgctgaaaccgaccct
gatattgctcaggttcaagtacaaaacaagttagctactgcaacgccactattacctgaa
gccgtgcaaaggcaaggtgttgtggttgcaaagtcagcccgtaactttttgatggtttat
gcgtttatgtctaaagatggcagcatgaccaacattgatattggcgactacgtgtcatca
aacgtgcaagatattgtttcgcgtgttgaaggtgtgggtgaagtacagttatttggctcg
cagtatgcaatgcgtatttggttagatccggctaagcttcaaaattataaattaacgcct
gcagatataagtgcatctatcagtgctcaaaatgcacaagtgtcggctgggcaactaggt
gctatgcctgcggtggcgggacagcaactcaacgcgactgtgacagcgcaaagccgctta
caaactcctgagcaatttagagatattttagttaaaaccaatgcagatggctcttttgta
aagttgagtgatgttgcccgtgttgagctaggtggtgaaagctaccgggttgtcgcgcgt
tatgatggaaaaccagcttctggcttagggattaaattggccagtggcgccaacgcgctt
gatactgcgcagggtgtaaaagatgccattgccgaattagagccattttttcctgaggga
cttgaagcggttgtgccttacgacactacaccatttgtggcgctttcaattgaaaaagta
attcatacgcttatagaagcggttgtgttggtgtttgttgttatgtacttgtttttacaa
aactttagagcgacgcttattccaacaattgcagtgccagtggtattgctgggtacgttt
ggtattttatacacttttggttactcaattaatacattgaccatgtttgccatggtgctt
gccatcgggttactagttgatgatgccattgttgttgtagaaaacgtagagcgactgatg
accgaagaaaaactctcagcgcttgatgcaacccgcaaatcaatggacgaaattaaaggc
gcacttgttggtattgcaatggtgctttctgctgtatttattccgatggccttttttagc
ggctcaacgggcataatctatcgtcagttctcaattacccttgtttctgctatgggttta
tcggtacttgtggcgcttatacttacgccggcactgtgtgcaacgcttttgaagcctagc
catgttcataatgataagtcgttatttggtaaattttttacagggtttaaccgcgggttc
gacaaaacaaattcgggtgcgcaaagctttgtgagccgtatgatcaaacatgctaaacgc
taccttgttatatactttttaattgtaggtggaatggcttatgtgttttcaaatttacca
accgcattcttaccagatgaagaccaaggcatattatttaaccaagtttcgttacctgcg
ggttctacaaccgagcaaacacttgaagtggttaaaaaagtagaaaaccactacttgaac
gaacaatctgaagcagtaaacggtatttttactgttaccgggtttagctttgcaggttct
ggccaaaactcagcaatagggtttgttaatcttaagcattgggatgaacgccaacgtgac
gatttatctgtgcaaggtgtagcaggtaaagctatggggtacttttccagtattaaagaa
gcgtttgtgtttgcttttccaccaccagcaattgtagaactgggaacagcaaatggtttt
aatatatttttacaagaccgtgtaggtttgggccacgatgcacttttagcagcacgtaat
caactattaggtttagcaagccaaagcccgatattggctggtgtacgccctaatggtcaa
gaagatatgccagaaatacaactcgataccgatttagctaaagcacaagcattgggtgtg
tcgcaaaccgatattaataacacccttgctacggcttggggtagtagttatgtaaatgac
ttcattgaccgtgggcgtgttaaaaaagtatacatgcaaggcgatgctgaatctcgaatg
gtgcctgaagatttaaataagtggtatgtacgtaataatgagggtgatatggttccgttt
tctgcctttgcaacggcctattggacttatggttcgccgcgtttagagcgttacaatggc
ttttcagcaatggaaatacaaggaaccgctgcacctggttacagcacaggacaagcaatg
gatgaaatggagcgtttggtaaaacagctgccaaatggtatttcgtctgaatggaccggt
atttcatttcaagaacgctctagcagcggccaagcacctttattgtatggtttgtcgttg
ttatttgtatttttatgtttagcggctctttatgaaagttggtcggtaccgtttgcggtt
atgatgattgttccgttaggtatatttggtgctgctatggctgcattgggtagcggatta
tcaaacgatatttacctgcaagtgggcttattaactacgatagggttagcgtctaaaaat
gccatattaattgtggaatttgctatccataaaatggacgaagggcttgatttagttgaa
gcggctgtggctgcagtaaggctgcgtttacgcccaattttaatgacttcaatggccttt
atttgtggtgttattccactcgctattgcatcaagtgcaggctctggtgcgcaaaacgca
ttaggcatttcaattattggtggaacactcgcatcttctattttggttgttgtttttgtg
ccgttgttttttgtattagtacgccgtgtattccctgcaaaagaaaaaaacactaacgag
gagacagcataa
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