KEGG   Punctularia strigosozonata: PUNSTDRAFT_73081
Entry
PUNSTDRAFT_73081  CDS       T03131                                 
Name
(RefSeq) Sm-like ribonucleo protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
psq  Punctularia strigosozonata
Pathway
psq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PUNSTDRAFT_73081
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psq03019]
    PUNSTDRAFT_73081
   03041 Spliceosome [BR:psq03041]
    PUNSTDRAFT_73081
   03032 DNA replication proteins [BR:psq03032]
    PUNSTDRAFT_73081
Messenger RNA biogenesis [BR:psq03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     PUNSTDRAFT_73081
Spliceosome [BR:psq03041]
 Complex A
  U1 snRNP components
   Sm proteins
    PUNSTDRAFT_73081
  U2 snRNP components
    PUNSTDRAFT_73081
 Complex B
  U1 snRNP components
    PUNSTDRAFT_73081
  U4/U6.U5 tri-snRNP components
    PUNSTDRAFT_73081
 Complex C
  U2 snRNP components
    PUNSTDRAFT_73081
DNA replication proteins [BR:psq03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     PUNSTDRAFT_73081
SSDB
Motif
Pfam: LSM LAL_C2
Other DBs
NCBI-GeneID: 18885420
NCBI-ProteinID: XP_007386645
JGI: 73081
LinkDB
Position
Unknown
AA seq 158 aa
MLSLINWRLKVTINDGRALTGQMLAFDRHMNLVLAECEEFRRVRPKKKPGETEAGPVQEM
KRSLGLVILRGETVVSLSVEGPPPVTDEDKKNVLPVGPGRGAPAGRGMGMMPPMAPPMMG
RPPMPFGPPGMPGPPPGFQGPPPGFQPPPGFPGAPPPG
NT seq 477 nt   +upstreamnt  +downstreamnt
atgctgagcttgatcaactggcggctgaaagtgacgatcaacgacggacgcgcgcttacg
ggccagatgctcgcgttcgaccggcacatgaatcttgtcctcgccgagtgcgaggagttc
aggcgcgtgcgcccgaagaagaagccgggcgagacggaggcgggcccggtgcaggagatg
aagcgtagcctgggccttgtcatcctccgcggcgagacggtcgttagcttgagcgtcgag
ggcccgccgccggtcacggatgaggacaaaaagaacgtgttgcctgttggtcccggtcgt
ggtgcgccagctggtcgcggaatgggcatgatgccgcccatggcgcccccgatgatggga
cgcccgcctatgccgttcggcccccctggcatgcccggtccccctcccgggttccaaggt
cccccgccgggcttccaaccgcccccaggattccctggcgcgcctcctcccgggtaa

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