Pseudomonas sp. RU47: CCX46_08275
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Entry
CCX46_08275 CDS
T11150
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
psru Pseudomonas sp. RU47
Pathway
psru00020
Citrate cycle (TCA cycle)
psru00785
Lipoic acid metabolism
psru01100
Metabolic pathways
psru01110
Biosynthesis of secondary metabolites
psru01120
Microbial metabolism in diverse environments
psru01200
Carbon metabolism
psru01210
2-Oxocarboxylic acid metabolism
Module
psru_M00009
Citrate cycle (TCA cycle, Krebs cycle)
psru_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CCX46_08275
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CCX46_08275
Enzymes [BR:
psru01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
CCX46_08275
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Paralog
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Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
cwf21
Motif
Other DBs
NCBI-ProteinID:
AZZ75146
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All DBs
Position
1848206..1851037
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AA seq
943 aa
AA seq
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MQESVMQRMWNSAYLSGGNAAYVEELYELYLHDPNAVPEEWRTYFQKLPADGNSATDVSH
STIRDHFVLLAKNQRRAQPVSAGSVSSEHEKKQVEVLRLIQAYRMRGHQAAQLDPLGLWQ
RPAPADLSINHYGLTNADLDTTFRAGDLFIGKEEASLREIHEALQQTYCRTIGAEFTHIT
DSEQRQWFQQRLESVRGRPTYSADIKSHLLERVTAGEGLEKYLGTKYPGTKRFGLEGGES
LIPMLDELIQRSGSYGTKEVVIGMAHRGRLNVLVNTFGKNPRELFDEFEGKKKVELGSGD
VKYHQGFSSNVMTAGGEVHLAMAFNPSHLEIVSPVVEGSVRARQDRRNDPTGEKVLPISI
HGDAAFAGQGVVMETFQMSQTRGFKTGGTVHIVINNQVGFTISNPLDSRSTEYATDVAKM
IQAPILHVNGDDPEAVLFVTQLAIDYRMQFKRDVVIDLVCYRRRGHNEADEPSGTQPLMY
QQITKQRTTRELYADRLTQGGVLDAERVQAKVDEYRNALDNGLHVVKSLVKEPNKELFVD
WRPYLGHAWTARHDTRFDLKTLQELSAKLLEIPEGFVVQRQVSKIYEDRQKMQAGGLPIN
WGYAETMAYATLAFEGHPIRMTGQDIGRGTFSHRHAVLHNQKDAGTYIPLQHLYDGQPRF
DLYDSFLSEEAVLAFEYGYSTTTPDALVIWEAQFGDFANGAQVVIDQFITSGEHKWGRLC
GLTMLLPHGYEGQGPEHSSARLERYLQLCAEHNIQVAVPTTPAQIYHLLRRQVIRPLRKP
LIVLTPKSLLRHKLAISTLEDLAEGSFQTVIPEIDTLDPKKVERVVLCSGKVYYDLLEKR
RAEGREDIAIVRIEQLYPFPEDDLKEVLAPYTNVKNAVWCQEEPMNQGAWYCSQHHLRRS
IGNLDKSLVLEYAGREASAAPACGYASMHAEQQEKLLQDAFTI
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaagcgtgatgcagcgcatgtggaacagcgcctacctttcaggtggaaacgct
gcctatgtggaagagctttatgagctctacctgcacgaccctaacgctgtgccagaagag
tggcgcacctactttcagaagttgcctgccgacggcaactctgccactgatgtttcgcac
tcgacaattcgcgatcatttcgtgctgctggcaaagaaccagcgccgcgctcaaccggtt
tccgccggcagcgtgagcagtgagcacgagaagaagcaagttgaagtgctgcgattgatc
caggcctaccgtatgcgtggccaccaggcagcccagcttgacccgctggggctgtggcag
cgtcctgcacctgcagacctgtcgatcaatcattacggcttgaccaatgccgatcttgat
acgaccttccgtgccggcgacctgttcatcggcaaagaggaagcgagcctacgcgaaatt
cacgaagcgttgcagcagacatattgccgcaccatcggcgctgaatttacgcacatcacc
gattccgagcagcgccagtggttccagcagcgtctggaaagcgtgcgtggtcgtccgacg
tactccgccgacatcaagagccacctgcttgagcgcgtgactgccggtgaaggcctggag
aaatacctgggcaccaaatacccgggcaccaagcgtttcggtctggaaggcggcgaaagc
ctgatcccgatgctcgacgaactgatccagcgttccggttcctacggcaccaaggaagtc
gtcatcggcatggctcaccgtggccgtctgaacgtactggtcaacaccttcggcaagaac
ccgcgcgagctgttcgacgagttcgaaggcaagaagaaggtcgagctgggttccggtgac
gttaaataccaccagggcttctcgtccaacgtgatgaccgccggcggtgaagttcacctg
gccatggcgttcaacccgtcccacctggaaatcgtttccccggtggtcgaaggttcggtt
cgcgcccgtcaggatcgtcgtaacgacccgaccggtgagaaggttctgccgatctccatc
cacggtgacgctgcattcgcaggtcagggcgtggtcatggaaaccttccagatgtcgcag
acccgcggtttcaaaaccggcggtaccgtgcacatcgtgatcaacaaccaggttggtttc
accatcagcaacccgctggactcgcgttccaccgagtacgccaccgacgttgcgaagatg
attcaggcgccgatcctccatgtgaatggtgatgatccggaagccgtgttgttcgtgacc
cagctggccatcgactaccgcatgcagttcaagcgtgacgtggtgatcgacctggtctgc
taccgtcgtcgcggccacaacgaggccgacgagccaagcggtacccagcctctgatgtat
cagcagatcaccaagcagcgcaccacccgtgagctgtacgctgatcgtctgacccagggc
ggtgtactcgacgcagagcgtgttcaggcgaaagtcgacgaataccgcaacgcgctggac
aacggtctgcacgtagtgaaatcgctggtcaaagagccgaacaaagagctgttcgtggac
tggcgtccgtatctgggccacgcctggactgcgcgtcacgacacccgctttgatctgaag
actctgcaagaactgtccgccaagctgctggaaattccggaaggcttcgtggttcagcgt
caggtttcgaagatctacgaagaccgtcagaagatgcaagccggcggcctgccgatcaac
tggggttacgccgaaaccatggcgtacgcgaccctggcgttcgaaggtcacccgatccgc
atgaccggtcaggacatcggccgcggtacgttctcgcaccgtcacgctgtgttgcacaac
cagaaagacgcgggcacctacattccgttgcagcacctgtacgacggtcagccacgcttt
gatctgtacgactcgttcctgtcggaagaagcggtactggcattcgaatacggttactcg
accaccacgccggatgcgctggtgatctgggaagcccagttcggtgacttcgccaacggt
gcacaggttgtaatcgaccagttcatcaccagcggcgagcacaagtggggccgtctctgc
ggtctgaccatgttgctgccacacggttacgaaggtcagggccctgagcacagctcggca
cgtcttgagcgttacctgcaactgtgcgccgagcacaacattcaggtcgccgtaccgacc
acgccagcacagatctaccacttgctgcgtcgtcaggtgattcgtccgctgcgcaagccg
ctgatcgtgctgacgccgaagtcgctgctgcgccacaaactggccatctcgaccctggaa
gatctggccgaaggttcgttccagaccgtgatcccggaaatcgatactctggacccgaaa
aaggtcgagcgtgttgttctgtgtagcggcaaggtctactacgacctgctggaaaaacgc
cgtgccgaaggccgtgaagatatcgccatcgtgcgtatcgagcagctgtacccattccct
gaggacgacttgaaagaagtcctggctccatacaccaacgtcaagaatgccgtttggtgt
caggaagagccgatgaaccagggcgcctggtactgcagccagcaccacttgcgtcgcagc
atcgggaacctcgacaagtctctcgtacttgagtacgcgggccgtgaggcttctgctgcc
ccagcttgtggttacgcatcgatgcacgccgagcagcaggaaaaactcctgcaagacgcg
tttaccatttaa
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