Pseudomonas sp. RU47: CCX46_24685
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Entry
CCX46_24685 CDS
T11150
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
psru Pseudomonas sp. RU47
Pathway
psru00300
Lysine biosynthesis
psru00550
Peptidoglycan biosynthesis
psru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CCX46_24685
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CCX46_24685
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psru01011
]
CCX46_24685
Enzymes [BR:
psru01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
CCX46_24685
Peptidoglycan biosynthesis and degradation proteins [BR:
psru01011
]
Precursor biosynthesis
Amino acid ligase
CCX46_24685
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
PipB2_N
Motif
Other DBs
NCBI-ProteinID:
AZZ78203
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Position
complement(5529716..5531179)
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AA seq
487 aa
AA seq
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MSLSLNKIFPHAGHDLLIRELALDSRNVRAGDLFLAVPGGKFDGRAHIADALQRGAAAVA
YEVEGATVLPITDVPLIPVKGLAAQLSDIAGRFYGEPSHHLNLIGVTGTNGKTSVTQLVA
QALDLLGQHCGIVGTLGSGFYGALESGLHTTPNPIAVQATLGDLKKAGAKAVAMEVSSHG
LDQGRVTALAFDVAVMTNLSRDHLDYHGSMEAYAEAKAKLFAWNDLKCRVVNLDDDFGRQ
LAAEKRESRLITYSLLDSSAYLFCREAQFDDHGVRATLVTPQGEHHLRSTLLGRFNLSNV
LAAVGALLGLDYALDEILKVLPKLEGPAGRMQRLGGGTQPLVVVDYAHTPDALEKVLTAL
RPHVKGQLLCLFGCGGDRDRGKRPLMAEVVERLADQVLVTDDNPRTEDPAVIFDDIRAGF
TAVDKVTFVAGRGQAIAQLVAGASAEDVIVLAGKGHEDYQEINGVRHAFSDLVEADHALT
AWEVAHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaagtctgaacaagatattcccccacgccggccacgatctgttgatccgtgaa
ttggcgctggacagccgcaacgtacgcgcgggcgacctgttcctcgccgtgcctggcgga
aaattcgatggccgtgcgcacattgccgatgccctgcaacgtggcgcggctgcggttgct
tatgaagtcgaaggcgccaccgtgctgccgatcactgacgtgccgctgattccggtcaaa
ggcctggcagcgcagttgtcggacatcgccgggcgtttttacggcgagccaagtcatcac
ctgaatctgatcggcgtgaccggcaccaacggcaagaccagcgtgacccaattggttgcg
caggcgctcgatctgctcggccagcattgcggcatcgtcggtactctcggttccggcttc
tatggcgcattggaaagtggtctgcacaccacgccgaacccgatcgccgtgcaagcgacg
ttgggcgacctgaaaaaggccggggccaaagccgtagccatggaagtctcgtcccacggt
ctggatcagggccgcgtcactgccttggcattcgatgtcgcggtgatgaccaacctgtcc
cgcgatcatctggattatcacggcagcatggaggcgtacgccgaggccaaggccaagctg
ttcgcctggaatgatctgaagtgccgcgtggtcaacctcgacgacgatttcggccggcaa
ctggccgctgaaaaacgtgaatcgcgcctgatcacctacagcctgctcgacagcagtgcg
tacctgttctgccgcgaagcgcagtttgacgaccacggtgtgcgcgccacattggtgacg
ccgcagggcgagcatcatctgcgcagcacactgctcggtcgcttcaacctgagcaacgtt
ctggcggcagtcggcgcgctgctcggtctggattacgcgctcgacgaaattctcaaagta
ctgccgaaactcgaaggcccggccggtcgcatgcagcgtctgggtggtggtacgcagccg
ttggtggtggtcgattacgcccacaccccggacgcgctggaaaaagtactgaccgcgttg
cgcccgcacgtcaaaggtcagctgctgtgcctgttcggctgcggcggtgatcgtgatcgt
ggcaaacgtccattgatggccgaagtggtcgagcgtctggccgatcaagtgctggtcacc
gacgacaacccgcgtactgaagaccccgcagtgattttcgatgacatccgcgccggtttc
acggctgtggataaagtcaccttcgtcgccggccgtggtcaggcgattgcgcaactggtc
gctggcgcgtccgccgaagacgtgattgtcctggccggtaaaggtcacgaggactatcag
gaaatcaacggcgtgcgtcatgccttctctgatctggtcgaggccgatcacgccctgacc
gcttgggaggtggcccatgcttaa
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