Pelodiscus sinensis (Chinese soft-shelled turtle): 102444474
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Entry
102444474 CDS
T02980
Symbol
PLOD3
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 3
KO
K13646
lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:
1.14.11.4
2.4.1.50
2.4.1.66
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss00310
Lysine degradation
pss00514
Other types of O-glycan biosynthesis
pss01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102444474 (PLOD3)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
102444474 (PLOD3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pss01003
]
102444474 (PLOD3)
Enzymes [BR:
pss01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.4 procollagen-lysine 5-dioxygenase
102444474 (PLOD3)
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
102444474 (PLOD3)
2.4.1.66 procollagen glucosyltransferase
102444474 (PLOD3)
Glycosyltransferases [BR:
pss01003
]
O-Glycan biosynthesis
O-linked Gal type
102444474 (PLOD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Anp1
DUF6492
HK_sensor_dom_bact
Motif
Other DBs
NCBI-GeneID:
102444474
NCBI-ProteinID:
XP_014432281
Ensembl:
ENSPSIG00000015387
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
LTALAALLLLAAARGTRDPDVLNPDKLLVITAATEQTEGYMRFLRTARYFNYTIKTLGLG
EEWRGGDVARTVGGGQKVRWLKEEMAKHTEQEDLVVMFVDSYDVLLASGPVELLRKFMAF
DSQVVFSAEAFCWPEWGLAERYPPVSAGKRFLNSGGFIGFAPAIHRVVQLWKYKDNDDDQ
LFYTRIYLDPGLREKFGLALDHKSKIFQNLNGAIDEVVLKFERNRVRARNVAYDTLPVVI
HGNGPTKLQLNYLGNYIPNSWTYEGGCGVCDQGLLDLSETPVSEGGPLPKPTPFLPQFLQ
RLLAWDYPYARLSLFLHNREVFHEPHVQEAWERLRGAFASIKLVGPEEELNQGEARDMGM
DICRQDPDCDYYFSMDADVLLTHPGALRDLIQQNQKVIAPMVSRPRKLWSNFWGALSPEG
YYARSEDYVELVQGKRIGVWNVPYISQAYLVHGETLRSELHDRSVFTMEETDPDMAFCKN
VRERGIFLHIPNLEDFGHLLSIANYNTSRLHPDLWQIMENPLDWQEKYIHENYSRVLDGE
LVEQPCPDVYWFPVLTELACDELVEEVEHYGIWSGGRHEDARLAGGYENVPTDDIHMNQI
GFEREWLHFLREFIAPVTEQLYPGYYTKVPGLRELQLGWGVPGAIFSYITLCTDPSPSRT
RDRAAIPWLLHQGGLFCAFACPSPSGQGSGYIMVSFVDP
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
ctgaccgccctggcagcgctgctgctgctggccgcagcccgcgggacccgggacccggac
gtgctgaatccagacaaactgctggtgatcaccgctgccacggagcagacggagggatac
atgcggttcctgcgcactgcccgctacttcaactacaccatcaagaccctgggcctgggc
gaggagtggcgcggaggggatgtggcccgcacggtcgggggcgggcagaaggtgcgctgg
ctgaaagaggagatggcgaaacacacagagcaggaggatctcgtcgtcatgtttgtcgac
agttatgatgtgctgctggccagtgggcccgtggagctgctgcggaagttcatggcattc
gacagccaggtcgtattctcggctgaggctttctgctggcctgagtggggcctggccgag
cggtacccccccgtcagcgccggcaagcgcttcctcaactcaggaggtttcatcggcttc
gccccggccatccaccgtgtggtccagctctggaaatacaaggacaacgacgatgaccag
ctattctacacccgcatctatctggaccctggcctgcgggagaaatttgggctggcactt
gaccacaagtcaaaaatcttccagaacctcaacggggccattgatgaggtggtgctgaaa
ttcgagaggaaccgggtccgtgcccggaacgtggcctatgacaccctccctgtggtgata
catggcaacgggcccaccaagcttcaactgaactacctggggaactacatccctaacagc
tggacctacgaggggggctgtggtgtctgtgaccaggggctgcttgacctgtcagagacc
ccggtgagcgagggggggccactccccaaacccacgcccttcctgccccagttccttcag
cgtctgctggcctgggactatccctacgcccgcctgagcctcttcctgcacaaccgcgag
gtgtttcacgagccccacgtgcaggaagcctgggagcggctgcgcggggccttcgccagc
atcaagctggtgggcccggaggaggagctgaaccagggcgaggcacgggacatgggcatg
gacatctgccggcaggaccccgactgtgactattatttcagtatggatgcggatgtcctc
ctgactcacccaggggccctgcgcgacctgatccaacagaaccagaaagtcatcgccccc
atggtgtcgcgcccacgcaagctctggtcaaatttttggggggcactgagccctgagggc
tactacgcccgctccgaggactacgtggagctggtgcagggcaagcgcattggggtgtgg
aatgtgccctacataagccaggcctacctggtgcacggggagacgctgcgctcggagctg
cacgaccggagtgtcttcaccatggaggagaccgaccccgacatggccttctgcaaaaac
gtgcgcgagagggggatttttctgcacatcccaaacctggaggattttggacacctgctc
tccatagccaattataacacatcccgcctgcaccccgacctctggcagatcatggagaac
cccctggactggcaggagaaatacatccatgagaactactcccgagtgctggacggggaa
ttggtggaacagccctgtcccgacgtgtattggttccccgtcctcactgagctggcctgt
gacgagttggtggaagaggtggagcattatgggatctggtccggaggacggcatgaggat
gctcgcctggccgggggctatgaaaacgtgccgaccgatgacattcacatgaaccagatt
gggtttgaacgtgagtggctgcacttcctgcgggaattcatcgcacccgtgaccgagcag
ctataccctggctactacaccaaggtaccaggcctgagagagctccagctgggatggggt
gtccctggggcaatcttcagttacatcactctgtgcacagaccccagccccagtcgcacc
cgtgaccgagcagctataccctggctactacaccaaggggggctgttctgtgccttcgct
tgcccatccccctcgggccagggcagtgggtacatcatggtgtccttcgtcgacccctaa
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