KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102444617
Entry
102444617         CDS       T02980                                 
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X2
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03440  Homologous recombination
pss03460  Fanconi anemia pathway
pss04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pss00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102444617 (BRCA1)
  09124 Replication and repair
   03440 Homologous recombination
    102444617 (BRCA1)
   03460 Fanconi anemia pathway
    102444617 (BRCA1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pss01009]
    102444617 (BRCA1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pss04121]
    102444617 (BRCA1)
   03036 Chromosome and associated proteins [BR:pss03036]
    102444617 (BRCA1)
   03400 DNA repair and recombination proteins [BR:pss03400]
    102444617 (BRCA1)
Enzymes [BR:pss01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102444617 (BRCA1)
Protein phosphatases and associated proteins [BR:pss01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102444617 (BRCA1)
Ubiquitin system [BR:pss04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102444617 (BRCA1)
  Multi subunit type E3
   BRCC complex
    102444617 (BRCA1)
Chromosome and associated proteins [BR:pss03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     102444617 (BRCA1)
DNA repair and recombination proteins [BR:pss03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     102444617 (BRCA1)
    BRCA1-A complex
     102444617 (BRCA1)
    BRCA1-B complex
     102444617 (BRCA1)
    BRCA1-C complex
     102444617 (BRCA1)
    BRCA complex
     102444617 (BRCA1)
   FA (Fanconi anemia) pathway
    Downstream FA components
     102444617 (BRCA1)
SSDB
Motif
Pfam: BRCT_assoc BRCT zf-C3HC4 zf-C3HC4_4 zf-C3HC4_2 zf-RING_2 zf-RING_UBOX RING_XB3-XBAT31 BRCT_2 zf-C3HC4_3 zf-Nse zf-RING_5 zf-RING_10 zf-RING_6 zf-MIZ Prok-RING_4 Zf_2nd_IFT121 U-box zf-ANAPC11 zf-RING_4
Other DBs
NCBI-GeneID: 102444617
NCBI-ProteinID: XP_006125762
LinkDB
Position
Unknown
AA seq 1890 aa
MDSSVAAIGDVQSVLLAMQKNLECPICLELIKEPVSTKCDHIFCRFCMFKLLSKKKKGLA
QCPLCKTEVTKRSLQENPRFKQLIEGLLETIHAFELDTGIKFLSSQDFSKNPVETNSADL
LWKEDSIIQSKGYRNRQKGIKEQEKENPTLEALTAAQVAENMVRRSSLRNKRQKCESGKA
VYIELGSDSSEDLFKKAGGPVGMGERESFQTPPQKGECEEDQKYAEKEHDKPQVAWTFKS
GAGEILSSDILDECGFSEEDSKGTWNSIEDFEAAHVNVAEDHLKASNSEAKQCDRTANAN
SLLKEDMSLFHSAEETDAGKTEFSHRNEESGLALSSENHLGKSKETSNDVQHIGAVETCQ
ADSNSLHEREPALKNLLQPKTPHNSPLNHVSGKRLKRSIQKVNEWFSKSNEILSSSSSQD
APAGAADAEEEDSSVSDRESCISEKTDARVNCMEVVVGCENDRSLLKSAVHSIEDKIFGK
TYKRERKSTPPVYARQMLQSPKVEDVTADVKPSSNSRTNKLKRKRKTASDLQPEDFVKKR
EEKALNEHSEDVNQCFVVRNAGRKKDGEVSTVNRSPVGGKNEDNISAELPVREGESILKN
NTEKVTCNSTDGEPAQNICNQKSTKKMRSSLTKQSRHSARPMCALQLVAERNLDCPDQAE
LQIDSYPSSEEPRKIASEQKQVRRSRRLQLQTERTVNDTKRRGEPNESARKHVRENKDSS
PGLQRNVLVHATECKDPIEQQFVLKHSIPLSGTGLKASDLETDKTHPNLDDSSTDIQTGK
GLLCAELSGENLNACSVVLATDLQVSETPGSHSLLQPPSTNVDHAACPAQNVSENNQPAA
SESEERPLYACSPKANQCCMESGLERFRNQKSHDTKSILELNTETEDSELDTQYLRNMFR
QSKRLSFTLHPGKESVTESTASETLSKSGANCVEYRHNTGHSKNEPPYFTKTVGLDEICE
REKPKICESARSISGHSPGTHFSSDTKCGHVINDGKNISQIPEQVQLFSPPRAATAKIKN
RSRLKKRRQPKEKRVSPEMLMESQISHNLSKSDENIGAQSNIEEQIIQRTNLRTINEAGS
GSGSNQRIEAENKGPVLNLQRVSPVVCCQSPAELSSKVIEKNSCEEECKQVKSDKDQVSQ
NASIGVLECLISEEALEQPAEDTSGFPLLSETPDGLLCSAGDIKENTSICEIDRKEISAV
FVKTGENSLLRDLDSGSSSSKSRSQNFVQEPRRLARKLQSSEEESSEDEELPCFQALIFH
KSASTPSQLTKQNKSREVSSATSSEEILALPNSSSGNNKAEQKTPGVLLRDACLPPSPES
ECSVDLFSSQSNMSEDSANRPQELNPVILAPCFKEMGSYNGNKEASPNGNEELAERKTDL
EDEHQGNQNVEPNLGEASGYDSEASHLGDSSGLSSQSEILTTQQQDAMQNNLKKLQQEMA
VLEAVLEEHGSQGFEFPPSSSERPPSRVEGTLTVGQMRPARGTTEVNLENHKISSSKGLS
ADGFHVMPSDHSNTQNKELEEEESLRSSDLLLSPPKSHRLKKTALEQGHRKAKTHSQEGT
FQQVDEAGLLEQEAVKQYNPDRSEPENAAEQEFGTKLNSAAVPRGNESRTPNSSPLKCFG
RLTHCQTAESTHHSATLWNINNGKSAQGCKRERSAFSSPPALRPAAGKENAKSPVVTCRR
QMSIVASGLNQSELLLVQKFARRTQSTLSNQITEGTTHVIMKTDTELVCERTLKYFLGIA
GRKWIVSYEWIVQSFKEGRILDEYDFEVRGDVINGRNHQGPRKARRSQTGTLFKDFEICC
YGPFIDMHTGDLEWMVELGGASVVKQPHLFTHTANSTAVVVVQPDAWHENAGYRAIQQEC
DATVVTREWVLDSVACYECQELGTYLVSQS
NT seq 5673 nt   +upstreamnt  +downstreamnt
atggattcatctgtggctgccattggagatgtacaaagtgtgctcttggctatgcagaag
aacttggagtgtccaatatgtttggagttgataaaagagccagtctcaacaaaatgtgac
cacatattttgcagattctgtatgtttaaacttctcagcaaaaagaaaaaaggcctggca
cagtgtccactgtgtaagaccgaggttaccaaaagaagtcttcaggaaaatccaagattt
aagcaactaattgaagggctactggaaaccatccatgcttttgaacttgacactggaatc
aagtttttaagtagtcaggatttttctaaaaatcctgtagaaaccaattctgctgatctc
ctgtggaaggaagattctatcatccaaagtaagggctacagaaaccgacaaaaaggaatt
aaagaacaagagaaagagaatcctaccttggaagctctcactgctgcccaggttgcagaa
aacatggtcaggaggagttccctcagaaacaaaaggcagaaatgtgaatctggaaaagca
gtgtacattgaattgggatctgattcttctgaagatctttttaaaaaagcaggtggtcct
gttggaatgggggagagagaatcatttcagactccaccacaaaaaggagagtgtgaagaa
gatcaaaaatatgctgagaaggaacatgacaagcctcaggttgcatggactttcaagtca
ggtgcaggagaaatactctcatccgatatcttagatgaatgcggtttctcagaggaagac
agcaaaggcacttggaacagtattgaagactttgaggctgctcatgtgaatgtggctgag
gatcatttaaaggcttcaaactcagaggcaaagcagtgtgacagaacagctaatgctaac
tctttactgaaagaggacatgagtttattccacagtgcagaagaaacggatgctgggaaa
actgaatttagtcatagaaatgaagagtctggcttagcactcagctcagaaaaccattta
ggtaaaagcaaggaaaccagtaatgatgtccagcatataggagctgtagaaacatgtcaa
gctgatagtaattccctgcatgaaagggaacctgctttaaagaatctattgcagcccaag
actcctcataacagtcctttgaatcatgtttctgggaaaagactgaagagaagcattcaa
aaagtcaatgagtggttttctaaaagcaatgagattctctcttccagttcctcccaggat
gctccagctggggcagctgacgcagaagaagaagattcatctgtatccgatagagagtcc
tgtatttcagaaaagactgatgcgagggtaaactgcatggaagttgtggtgggatgtgaa
aatgatagaagcttgttaaaatcagctgtacatagcattgaagataaaatatttgggaaa
acctataaaagagagaggaaatcaacccctcctgtctacgcgagacagatgctacaaagt
ccaaaagtggaagatgttactgctgatgtgaaaccatcaagtaattccagaacaaataaa
ttaaaacggaaaagaaagactgcgtctgatctgcaacctgaggactttgtcaagaaaaga
gaagaaaaggctctaaacgagcactctgaagatgttaatcagtgctttgttgttagaaat
gctggaaggaagaaagatggtgaagtttccactgttaacaggagtccagtgggtgggaaa
aatgaggacaatatttcagcagaacttcccgtcagagaaggggaatccatattgaaaaat
aacactgagaaagtaacttgcaacagcacagatggagaaccagcacagaatatctgtaac
caaaagagtactaaaaaaatgagaagttcgctgacgaaacaaagcaggcattctgctagg
cccatgtgtgcactgcagctggtagctgagagaaacttagattgccctgatcaggctgag
ctgcagattgatagttacccaagcagtgaagagccaaggaaaattgcttcagaacagaaa
caagtccgacgcagcaggaggcttcagttacagactgagagaactgtaaacgacaccaag
agaagaggtgagccaaatgagagcgcaagaaagcatgtccgtgaaaacaaagattcctcc
cccgggttacagaggaatgtgttggtccatgccactgaatgcaaagatcctattgagcag
cagtttgtattgaaacatagcatacctctgtcgggcacgggtctgaaggccagtgacttg
gaaacagacaaaacacaccctaatcttgacgacagttctactgatatccagactggaaaa
ggcctcttatgtgctgaattatcaggggagaatttaaatgcttgttctgttgtgctggct
acagatttgcaagttagtgagactccaggcagccattcactcctgcagcctccttccaca
aatgtggaccatgctgcctgcccagcgcagaatgtgtctgagaataatcagcctgcagca
agtgagtctgaggagagaccattgtatgcttgttcaccaaaagccaatcaatgttgcatg
gaaagtggcttggaaaggttcaggaaccagaagtcacatgacactaaaagcattttggaa
ttgaacacagaaactgaagacagtgagctagatacgcagtatctccgaaacatgttcaga
cagtcaaaaagactgtcatttaccctccatccagggaaggaatcagtgacagaaagcact
gcttctgaaactctaagcaaatcaggtgcgaactgtgtagaatataggcataacactgga
cactcaaaaaatgagcctccatattttacaaaaacagtgggcctggatgagatttgtgag
agagagaaacctaaaatatgtgaatctgctagaagtatttctgggcatagtccaggaact
cacttttccagtgacaccaaatgtggacatgttattaacgatggcaagaatatttcacaa
attcctgagcaagtacagttattctcaccgccaagagcagccactgccaagattaagaat
aggagcagactgaaaaaacggagacagccaaaggaaaagcgagtttcacctgaaatgttg
atggaaagtcaaataagccataaccttagcaaaagtgatgaaaacataggtgcccagagt
aatatagaagagcaaattatccaaagaactaatttaagaacaattaatgaagcaggctcc
ggttcaggaagcaatcaaagaatagaagctgaaaacaaagggccagtattaaatttacag
cgggtatctcctgtagtttgttgtcaaagccctgctgaattgagcagcaaagtaattgaa
aagaactcttgtgaagaggaatgcaaacaagtaaagagcgataaagaccaagtatcccaa
aatgccagcattggtgtgctggagtgcttaatttcagaggaggctctagaacaacccgct
gaagatactagtggttttccattgctgtctgagacccctgatggcttattgtgctctgca
ggtgacattaaagagaacaccagcatttgtgaaattgacaggaaagaaatttctgccgta
tttgttaaaacaggtgagaattccttgttaagagatctggacagtggcagcagtagttct
aagtcaaggtcacaaaactttgttcaggaacccagaagactggcgcggaaattgcagtct
tctgaggaggagtctagtgaagatgaagaactaccatgcttccaggcactaatatttcac
aaatcagcaagcacaccatcacagcttacaaaacagaacaagtctagggaagtgtcttca
gcaacctcttcagaggagattctagcgttgccgaacagtagcagtggcaataataaagct
gaacagaaaacgcctggagtcctcttaagagatgcgtgtcttcctccaagcccagaatcg
gaatgctcagttgacttattttcttcccagtccaacatgtcagaagattcagccaacaga
ccacaagaattgaatccggtaatcctagcaccttgtttcaaagaaatgggaagctacaat
ggaaacaaagaagctagtccaaatggtaatgaagagctggcagaaagaaaaactgatttg
gaagatgaacaccaaggaaaccagaatgtggaaccaaatttaggtgaagcatctggatat
gacagtgaagcgagtcacctaggagattcttctggactgtcctcccagagcgagatcctt
accacacagcaacaggatgccatgcaaaacaacttaaaaaaacttcaacaggaaatggct
gtgcttgaggctgtgctggaagagcatggtagccagggttttgaattcccaccctcatcc
agtgaacggcctccttccagagtagaaggaacactcacagtgggacagatgaggccagct
agaggaacaacagaagtaaatcttgaaaaccataaaatcagcagttcaaagggactttca
gctgatgggttccatgtaatgccgagtgaccattccaacacacaaaacaaagaactagaa
gaagaagaaagtttgaggtcatcggatttattgctttcccctcctaaatcccatcgatta
aaaaagacagctctggagcaaggccacaggaaagccaaaactcactcgcaggagggaaca
tttcagcaggttgatgaggcagggctgctggaacaagaggcagtgaaacaatataatcct
gatagatctgaaccagaaaatgcagctgagcaggaatttggaacaaagctaaacagtgca
gctgttccgcgtgggaatgagagcaggactccaaacagctctcccttgaaatgttttgga
aggcttacccactgtcaaactgcagaatccacacatcattcggctacactttggaatatt
aataacgggaagagcgctcagggatgtaagcgggagagaagcgcattttcctcaccacct
gctttgcgccctgcagctggaaaagaaaatgccaaaagcccagttgtgacctgcaggaga
caaatgtcaattgtggcctcaggtctgaaccagagtgagcttttactggtgcagaagttt
gccagaagaacccagagcactttatctaatcaaattactgaaggaacaacccatgtcata
atgaaaacagatactgagctagtgtgtgagcggacgctgaagtactttctgggcattgca
ggaagaaaatggatagttagctatgaatggattgttcagtcttttaaggaaggaaggata
cttgatgagtatgactttgaagtgagaggagatgtgatcaatgggagaaaccaccaaggc
cctaggaaagctagacgatcccagactggaacgctcttcaaagactttgagatctgttgc
tatggccctttcatcgatatgcacacaggtgatttagagtggatggtggagctcggtggc
gcctctgtggtgaagcagcctcacctgttcacacacacagcaaactcgactgctgtagta
gttgtacagcctgatgcttggcatgaaaacgcagggtacagagcaatccaacaggagtgt
gatgctaccgtggtgacccgagagtgggtgctagacagcgtggcctgctacgagtgccag
gagcttgggacctaccttgtgtcccagtcatga

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