Pelodiscus sinensis (Chinese soft-shelled turtle): 102446392
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Entry
102446392 CDS
T02980
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102446392 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pss03041
]
102446392 (EFTUD2)
Spliceosome [BR:
pss03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
102446392 (EFTUD2)
Complex C
U5 SnRNP specific factors
102446392 (EFTUD2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
102446392
NCBI-ProteinID:
XP_075767833
Ensembl:
ENSPSIG00000004505
LinkDB
All DBs
Position
29:complement(114949..151899)
Genome browser
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDELGRESKDLDELDDDDDDDDVGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSFLFNVMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFVLEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHSYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQISWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacacagacttgtatgacgagttcgggaattatatcgggccagagctcgactcggat
gacgacgacgatgaactgggtagagagtccaaggatcttgatgagcttgatgacgatgat
gatgatgacgacgtaggagatcatgatgaagatcatcctggaatggaggtggtactgcat
gaggataagaaatactatccaacagccgaagaggtttatgggcctgaggtagagaccata
gtacaggaggaagatacacagcctctcactgagcctattattaaacctgtgaaaaccaag
aaattctccttgatggagcagacgttgcctgtcactgtgtatgaaatggatttcctggca
gatctgatggacaactctgagctgattcggaacgtgaccctgtgcgggcatctccaccat
ggcaagacatgctttgtggattgcctgatcgagcagacgcacccggagatcaggaagcgc
tacgaccaggatctttgctacaccgatatactgttcacagagcaagagagaggggttgga
atcaagagcaccccggtgactgttgttctgccagacacgaaggggaaatcctttctcttc
aacgtcatggatacaccaggccacgtgaacttttcggacgaggtcactgccggccttcgc
atttcggacggagtggtgctcttcatcgacgcggccgagggggttatgctgaacacagag
aggctgatcaagcacgcggtgcaggagaggctggccgtgaccgtgtgcattaacaagata
gaccggctgatcctggagctgaagctcccccccacggacgcctattacaagctccggcac
atagtggacgaggtcaatggcttgatcagcatgtattccaccgacgagaacctgatcctg
tctcctctgctggggaacgtctgcttctccagctcccagtacagcatctgcttcaccctg
ggctcctttgccaagatttatgcggacacgttcggagacatcaactaccaggagtttgca
aagcggctgtggggcgacatctacttcaaccccaagacacgcaagttcactaaaaaggcg
ccgaccagcagttcccagcggagcttcgtggagtttgtcctggaacctctgtacaagatc
ctggctcaggtggttggcgatgtggacaccaccctcccccgcacgctggatgagctcggc
atccacctgaccaaagaggagctgaagctgaacatccggcccctgctaaggctggtctgc
aagaagttctttggggagttcacgggcttcgtggacatgtgtgtgcagcacattccctcc
ccaaaggtgggcgccaagaccaaaatcgagcacagctacaccggcggcgtcgactcagac
ctgggcgaggccatgagcgagtgtgaccctgacggcccgctgatgtgccacaccacgaaa
atgtacagcacggacgacggcgtccagttccacgcctttggcagagtgctgagcgggacc
atccacgccgggcagcctgtcaaggtgctgggagaaaactacaccttggaggacgaagag
gattcgcagatctgcactgtgggtcggctgtggatctcggtggcaagataccacatcgag
gtgaaccgggtccctgctggcaattgggtcctgatcgagggggtggaccagcccatcgtg
aagacagcaaccgtcacagagccgcgaggcaacgaggaggctcagatcttccggccgctg
aagttcaacaccacgtctgtcatcaaaatagctgtggagccagtcaacccttcggagctc
ccgaaaatgctggacggcctgcggaaggtcaacaagagctacccgtcgctcaccaccaag
gtggaggaatcgggggagcacgtgatcctgggaacgggggagctgtacctggactgcgtg
atgcacgacttgcggaagatgtattcagagatcgatatcaaggttgctgatccggttgtg
acgttctgtgagactgttgtggaaacctcctccctgaagtgttttgctgagacgcccaat
aagaagaacaagatcacgatgattgcggagcccctggagaaggggcttgcggaggacatt
gagaacgaggtggtgcagatcagctggaacaggaagaagctgggcgagttcttccagacc
aagtatgactgggatttgctggctgcccgctccatctgggcctttgggccagatgccacc
ggcccaaacattctggtggacgacacactgccctcagaggtggataaagccctgctgggc
tccgtgaaggacagcatcgtgcagggcttccagtggggcacccgggaagggcccctctgt
gacgaattgatccgcaacgtgaagttcaagatcctggatgctgtgattgcgcaggagccg
ctgcaccggggcggggggcagattatccccaccgcccgcagggtcgtgtactccgccttc
ctcatggccacgccgcggctgatggagccgtactactttgtggaggtgcaggcgcctgcg
gattgcgtgtctgccgtgtacaccgtgctggcccggcggaggggtcatgtgactcaggat
gcgccaatcccaggctcccccctttacaccatcaaagcctttatcccggccatcgactcg
tttgggttcgagaccgacctgaggactcacacgcagggccaggcgttctccctgtctgtc
ttccaccactggcagatcgtgcctggagaccccttggacaagagcatcgtcatccggccc
ttggagccccagccggcaccgcacctggccagggagttcatgatcaagaccaggcgcagg
aagggcctgagcgaggacgtgagcatcagcaagttcttcgacgaccccatgttgctggag
ctggccaagcaggacgtggttctgaactaccccatgtga
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integrated database retrieval system
