Pelodiscus sinensis (Chinese soft-shelled turtle): 102446392
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Entry
102446392 CDS
T02980
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component isoform X1
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102446392 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pss03041
]
102446392 (EFTUD2)
Spliceosome [BR:
pss03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
102446392 (EFTUD2)
Complex C
U5 SnRNP specific factors
102446392 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
GTP_EFTU_D2
EFG_IV
EFG_III
EFL1
EF-G_D2
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
102446392
NCBI-ProteinID:
XP_006110608
Ensembl:
ENSPSIG00000004505
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDELGRESKDLDELDDDDDDDDVGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSFLFNVMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFVLEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHSYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQISWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DECKYKTVGSCE
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggacacagacttgtatgacgagttcgggaattatatcgggccagagctcgactcggat
gacgacgacgatgaactgggtagagagtccaaggatcttgatgagcttgatgacgatgat
gatgatgacgacgtaggagatcatgatgaagatcatcctggaatggaggtggtactgcat
gaggataagaaatactatccaacagccgaagaggtttatgggcctgaggtagagaccata
gtacaggaggaagatacacagcctctcactgagcctattattaaacctgtgaaaaccaag
aaattctccttgatggagcagacgttgcctgtcactgtgtatgaaatggatttcctggca
gatctgatggacaactctgagctgattcggaacgtgaccctgtgcgggcatctccaccat
ggcaagacatgctttgtggattgcctgatcgagcagacgcacccggagatcaggaagcgc
tacgaccaggatctttgctacaccgatatactgttcacagagcaagagagaggggttgga
atcaagagcaccccggtgactgttgttctgccagacacgaaggggaaatcctttctcttc
aacgtcatggatacaccaggccacgtgaacttttcggacgaggtcactgccggccttcgc
atttcggacggagtggtgctcttcatcgacgcggccgagggggttatgctgaacacagag
aggctgatcaagcacgcggtgcaggagaggctggccgtgaccgtgtgcattaacaagata
gaccggctgatcctggagctgaagctcccccccacggacgcctattacaagctccggcac
atagtggacgaggtcaatggcttgatcagcatgtattccaccgacgagaacctgatcctg
tctcctctgctggggaacgtctgcttctccagctcccagtacagcatctgcttcaccctg
ggctcctttgccaagatttatgcggacacgttcggagacatcaactaccaggagtttgca
aagcggctgtggggcgacatctacttcaaccccaagacacgcaagttcactaaaaaggcg
ccgaccagcagttcccagcggagcttcgtggagtttgtcctggaacctctgtacaagatc
ctggctcaggtggttggcgatgtggacaccaccctcccccgcacgctggatgagctcggc
atccacctgaccaaagaggagctgaagctgaacatccggcccctgctaaggctggtctgc
aagaagttctttggggagttcacgggcttcgtggacatgtgtgtgcagcacattccctcc
ccaaaggtgggcgccaagaccaaaatcgagcacagctacaccggcggcgtcgactcagac
ctgggcgaggccatgagcgagtgtgaccctgacggcccgctgatgtgccacaccacgaaa
atgtacagcacggacgacggcgtccagttccacgccttcggcagagtgctgagcgggacc
atccacgccgggcagcctgtcaaggtgctgggagaaaactacaccttggaggacgaagag
gattcgcagatctgcactgtgggtcggctgtggatctcggtggcaagataccacatcgag
gtgaaccgggtccctgctggcaattgggtcctgatcgagggggtggaccagcccatcgtg
aagacagcaaccgtcacagagccgcgaggcaacgaggaggctcagatcttccggccgctg
aagttcaacaccacgtctgtcatcaaaatagctgtggagccagtcaacccttcggagctc
ccgaaaatgctggacggcctgcggaaggtcaacaagagctacccgtcgctcaccaccaag
gtggaggaatcgggggagcacgtgatcctgggaacgggggagctgtacctggactgcgtg
atgcacgacttgcggaagatgtattcagagatcgatatcaaggttgctgatccggttgtg
acgttctgtgagactgttgtggaaacctcctccctgaagtgttttgctgagacgcccaat
aagaagaacaagatcacgatgattgcggagcccctggagaaggggcttgcggaggacatt
gagaacgaggtggtgcagatcagctggaacaggaagaagctgggcgagttcttccagacc
aagtatgactgggatttgctggctgcccgctccatctgggcctttgggccagatgccacc
ggcccaaacattctggtggacgacacgctgccctcagaggtggataaagccctgctgggc
tccgtgaaggacagcatcgtgcagggcttccagtggggcacccgggaagggcccctctgt
gacgaatgtaagtacaagaccgtgggcagctgtgaataa
DBGET
integrated database retrieval system
