Pelodiscus sinensis (Chinese soft-shelled turtle): 102447926
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Entry
102447926 CDS
T02980
Symbol
THBS1
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04115
p53 signaling pathway
pss04145
Phagosome
pss04148
Efferocytosis
pss04350
TGF-beta signaling pathway
pss04510
Focal adhesion
pss04512
ECM-receptor interaction
pss04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
102447926 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102447926 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102447926 (THBS1)
04148 Efferocytosis
102447926 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
102447926 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
102447926 (THBS1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102447926 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pss04131
]
102447926 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pss00536
]
102447926 (THBS1)
Membrane trafficking [BR:
pss04131
]
Endocytosis
Phagocytosis
Opsonins
102447926 (THBS1)
Glycosaminoglycan binding proteins [BR:
pss00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102447926 (THBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
cEGF
TSP1_ADAMTS
TSP1_CCN
Laminin_G_3
EGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
102447926
NCBI-ProteinID:
XP_006124000
Ensembl:
ENSPSIG00000004513
UniProt:
K7FA03
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MELSGGLFLLLMLSVYATNQIPESGGDDNSVFDLFELIGFTRKGAGRRATGVQLVKGPEP
SSPAYRIEDASRIPAMPDDKFQDLLDAIYAEKGFILLATLRQAKKSRGTLLAVERKDSSG
HIFNLVSNGKAGTLDLSLFGDGKQQVVSVEDALLATGHWKNITLFVQEDRAQLYVGCEKM
ENAELDIPIQNIFTRDLASSAKLRIAKGDVNDNFQGVLQNVRFVFGTTLEAILRNKGCSS
STNAIITLDNPINGSSPAIRTNYIGHKTKDVQAVCGFSCEELTNMFVEMQGLRSMVTILQ
DKVRKVTEENELIAKVVQITPGVCIHNGILHKNKEEWTIDSCTECTCQNSATICRKVSCP
LMPCSNATVPDGECCPRCWPSDYAEDGWSPWSEWTSCSVTCGNGVQQRGRSCDSLNNRCE
GSSVQTRTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGIGMITRIRLCNSPVPQMNGKPC
EGEARETKSCQKDPCPINGNWGPWSPWDVCTVTCGGGIQKRGRLCNDPEPQYGGKDCVGD
ATGVQVCNKHDCPIDGCLSNPCFAGTTCTSSPDGSWKCGACPTGYHGNGVQCKDIDECQE
VPDTCFVLNGVHRCENTEPGYNCLPCPPRFTGTQPFGRGIEDATANKQVCKPRNPCTDGT
HDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCK
KDNCPNLPNSGQEDYDKDGIGDACDNDDDNDNIPDDRDNCPFIYNPQQYDYDRDDVGDRC
DNCPYNHNPDQTDTDNNGEGDACAVDIDGDGILNERDNCQYVYNVDQRDTDLDGVGDQCD
NCPMAHNPDQEDSDSDRIGDECDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDAC
DHDDDNDGIPDDKDNCRLVANPDQTDSDGDGRGDACKDDFDHDNVPDIDDICPENVDISE
TDFRRFQMVPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFFI
NTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTRAQGYSGLSIKVVNSTTGPGE
HLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMAD
SGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggagctatcaggcggactttttctcctcctaatgctaagtgtctatgcaacaaaccag
atcccagagtctgggggagatgataatagtgtatttgatctcttcgaactcattggcttc
actcgcaaaggagccggacgccgtgcaactggggtgcagttggtgaaggggcctgagcct
tccagccctgcttaccgcattgaggatgccagccgcatccctgccatgcctgatgacaag
ttccaagatttgctggatgccatctatgctgaaaagggcttcattttgctggctactctc
cggcaggccaagaagagtcggggcaccctactggctgtggagcgcaaggacagttcgggc
catatcttcaacctggtgtctaatggcaaagcaggcactctggatctgagcctgtttggt
gatgggaagcagcaggtggtttcagtggaggatgccctattagccactggccactggaag
aacattaccctgttcgtgcaggaggaccgggcccagctgtatgtagggtgcgagaaaatg
gagaatgctgaactggacatccccatccaaaacatcttcaccagagacctggccagcagt
gccaagctccgcatcgccaagggtgatgtcaatgacaacttccagggagtgctgcagaat
gtgcggtttgtctttggaacaaccctggaagccattctaaggaacaaaggttgctccagc
tctactaatgcaatcattaccttggacaatcccatcaatggctccagcccagctatccgc
actaattacattggccacaaaacaaaggatgtccaggcagtctgtggcttctcctgtgaa
gaactcacaaatatgtttgtagaaatgcaaggactgcggtccatggtgacaatccttcaa
gacaaagtgcgcaaagtgactgaagaaaacgaattgattgccaaagtagtccagatcact
cccggagtgtgcattcataatggaattctgcataaaaacaaagaagagtggactattgat
agctgcactgaatgtacttgccagaactctgccactatatgcaggaaagtatcttgccct
ctcatgccttgttctaatgctactgttcctgatggggagtgctgtccacgatgctggccc
agtgactatgcagaagatggttggtccccttggtctgagtggacttcatgctctgtgacc
tgtggaaatggggttcaacaaagaggtcgttcttgtgacagtctcaataatcgctgtgaa
ggttcctctgtacagactcggacctgccacattcaggagtgcgataagaggttcaaacag
gatggtggttggagccactggtcaccatggtcatcatgctctgttacttgtggcattggc
atgatcactagaatccgtctctgcaactctccagtcccacagatgaatggcaaaccatgt
gagggtgaggcaagggaaaccaaatcatgccagaaagacccctgcccaataaatggaaac
tggggaccctggtctccatgggatgtatgcacagtcacatgtggaggaggtattcaaaaa
cgtggacgtctttgcaatgaccctgagcctcagtatggtgggaaggactgtgtaggtgac
gccacaggagtgcaggtctgcaacaagcacgactgtccaattgatggttgcctgtctaat
ccctgttttgctggaacgacatgcaccagttcccctgatggttcttggaagtgtggtgcc
tgtcccactggttaccatggcaatggtgttcaatgcaaagatattgatgagtgtcaagag
gttcctgatacctgctttgtcctcaatggagtgcacaggtgtgaaaacactgaacctgga
tacaactgcttgccttgcccaccacgtttcactggaacacagccttttggtcgaggtatc
gaggatgccacagctaacaagcaggtctgcaagccacgtaatccatgcacagatggaact
catgactgcaacaagaatgccaagtgcaactaccttggccatttcagtgatcctatgtac
cgctgtgagtgtaaaccaggctatgctggcaatggcataatctgtggtgaagatacagat
ttagatggatggccaaatgaggaccttgtctgtgttgccaatgccacttaccactgcaaa
aaagataactgtcccaatcttcccaactctggacaagaagactatgataaggatggaatt
ggtgatgcctgtgataatgatgatgataatgataacattccagatgacagggacaactgc
ccattcatttacaacccgcagcagtatgactatgatagggatgatgttggtgaccgctgt
gataactgcccctacaatcacaatcctgatcaaactgacactgataacaatggagaagga
gatgcatgtgctgtggatattgatggagatggcattcttaatgaaagggataactgccaa
tatgtctacaatgtagaccagagggatacagatttggatggggttggagatcaatgtgac
aactgccctatggcacacaatccagaccaggaggattctgactctgaccgcataggtgat
gaatgtgacaacaatcaggacatagatgaagatggccatcaaaataacctagataattgt
ccctatgtgcccaatgctaatcaagcagaccatgacaaggatggcaaaggtgatgcctgt
gatcatgatgatgataatgatggtatccctgatgacaaagataactgccgactggttgct
aacccagaccagactgactctgatggtgatggacgtggtgatgcttgcaaagatgacttt
gaccacgacaacgtgccagacattgatgacatctgtcctgagaatgttgacatcagtgag
acagatttccgtcgatttcagatggttcccctggatcccaagggaacatcgcaaaatgat
cctaactgggtggttcgtcaccagggtaaagaactggtacagactgtcaattgtgatcct
ggacttgcagtgggatttgatgaattcaatgctgtggacttcagtggcacattcttcatc
aatacagaaagagatgatgactatgctggctttgtatttggttatcagtctagcagccgt
ttctatgtagtcatgtggaagcagatcacccagtcctattgggactcaacaccaaccaga
gctcagggatactcaggtctttctatcaaagttgtgaactccactacaggtcctggagag
caccttcgaaatgctctgtggcacactggcaacaccccaggacaggtacggaccttgtgg
catgaccctcgtcacataggctggaaagattttactgcctatagatggcgtcttagtcac
agaccaaagactggatacattagagttgtaatgtatgaagggaagaaaatcatggctgat
tcaggaccaatctacgataagacatatgctggcggtcggttaggattatttgtcttctct
caagaaatggtattcttctcagaccttaaatatgaatgcagagatccataa
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integrated database retrieval system
