KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102451576
Entry
102451576         CDS       T02980                                 
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
  KO
K02084  apoptotic protease-activating factor
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04115  p53 signaling pathway
pss04210  Apoptosis
pss05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pss00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    102451576 (APAF1)
   04115 p53 signaling pathway
    102451576 (APAF1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102451576 (APAF1)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st APAF1_C WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_WDR36-Utp21_2nd WHD_APAF1 WD40_Gbeta NB-ARC Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_IFT122_1st NBCH_WD40 CARD WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_WDR41 Beta-prop_WDR19_1st WD40_like Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_Aladin eIF2A Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_VPS8 Beta-prop_DCAF4 Beta-prop_HPS5 CARD_2 PEP5_VPS11_N Ge1_WD40 Beta-prop_SPT8 Beta-prop_Nup120_160 AAA_16 Beta-prop_IFT140_2nd Beta-prop_DCAF12 AAA_22 nSTAND6 Beta-prop_RSE1_2nd LRRC37
Other DBs
NCBI-GeneID: 102451576
NCBI-ProteinID: XP_006118337
Ensembl: ENSPSIG00000011998
LinkDB
Position
Unknown
AA seq 1251 aa
MDVKSRNHLLLNHEALERDIKTSYIMDHMIADEVLTLQEEEKVKAQTTQRERAAMLIKII
LAKDNYSYISFYNALLHEGYKDLAALLQDGIPILSCKGNKSMDGGTSYVRTVLCEGGVPQ
RPVVFVTRPKLVKTIQQKLCNLRSNPGWVTVYGMAGCGKSVLTAEALRDHHLLEDCFPGG
VHWISVGKQDKAGLLMKLQNICSRLDQDFSLSQRPPLNIEEAKDRLRLLMLRKYPRCLLV
LDDIWDSWVLKAFDNQCQVLITSRDRSVTDSVTGNKYEVSVESGLAHDKGLEILSLFVNM
KITDLPEEANSIVRECKGSPLVVSLIGALLRDFPNRWEYYLRQLQNKQFKRIRKSSSYDY
EALDEAMSMSVEMLNEKFQDYYKDLSVLQKDVKVPTKVLCILWDMETEEVEDILQEFVNK
SLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQLQELHKKVVNQYKKHYKLHIPTPAQEDCM
YWCNFLAYHMASANMQNELCALMFSLDWIKAKTELVGPAHLIHEYVEYSPILDQKDSIIR
ENFQEFLSLNGHLLGRQPFPDIIQLGLCQPETSEVYQQAKLQAQQELVKGAFYLEWVNKK
SMKNLSRLVVRPHTDAAYHACFSKDGQRITSCGADKTLQVFKTKSGEKLLEIKAHDDEVL
CCSFSADDRFVATCSVDKKVKIWNSRTGQLLQVYKEHDEQVNCCQFNNMDDQLLLATCSN
DTYIKLWDLNRKHCRNTMFGHTNSVSHCRFSPDDRCVASCSVDGTLKFWDVCSGNELKTI
DIKEFFRNADEHQDDVEVLVKCCSWSANCTTIMVAAKNRLLLLDVITSDLLANVLISHHS
TIQYCDYCPGNQLVAVALSHYSVELWNTESFAKVADCRGHLSWVHCVTFSPDGSLFLTSS
DDQTIRIWESSKVCKSSAVVLKRELDVVFQEDKVVVLAILNQKHLQLINGNTGHTEYLTE
AQESPICCCCLSEDLQYAAFGEENGTVKVLELSNRRVFKSSTGHEKSVQHCQFTSDGQTL
ISSSDDSTIQVWNWQSEEYIFLKGHKEAVKNFRLLENSRLLSWSFDGTVKVWNICNGKIE
DDLVCHEDAVLSCAVSLDATKFSSTSADKTAKIWSFESSSVLHELIGHKGCVRCCTFSFD
DKFLATGDDNGEIRIWDVSGGELLHLYSPVTVDGGESTHGGWVTDLCFSPDSNMLVSCGG
YLTWWNIMTKEPLQTFYTNGTNLKSICVSPSFKIYVTIDNLGILYVLQMME
NT seq 3756 nt   +upstreamnt  +downstreamnt
atggatgtgaagtctcgaaatcatttgcttctgaatcatgaagcattggaaagagacatc
aagacctcttacattatggatcatatgattgctgatgaagtactaacattacaggaggag
gagaaagtaaaagcacagactacgcagagggagcgagctgctatgctaataaaaattatt
cttgcaaaagataattattcatatatatccttctataatgcactgcttcatgaagggtac
aaagacctggctgctcttcttcaggatggaatacctatcctctcttgtaaaggaaacaag
tctatggatggaggtacttcatatgtgaggactgtcctctgtgaaggtggagtaccacaa
agaccagttgtatttgttactcgtccaaaactagtgaaaacaattcaacagaaactgtgt
aacttaagaagtaatccaggttgggtcactgtttatggaatggcaggttgtgggaagtct
gttttaacagcagaagcacttcgggatcaccatcttttggaagattgcttcccaggaggg
gtacattggatttctgttggaaaacaagacaaggcgggacttctaatgaaactccagaat
atttgtagtagactagaccaggatttctctctttcacagaggccaccacttaatattgaa
gaggctaaagaccgtcttcgtctgctgatgctgcgcaaataccccaggtgtctcctagtt
ctggatgacatttgggattcctgggtattaaaagcttttgataatcagtgtcaagttctt
attaccagtagggataggagtgtaactgactcagtgactggcaataaatatgaagtttct
gtggagagtggattagcacacgataaaggactagaaattttatctctgtttgttaatatg
aaaataacagatttgccagaagaagctaatagtattgtaagggaatgcaaaggttcccct
cttgttgtgtcattgataggtgcactattacgagatttccctaaccgatgggaatattac
ctcagacagctgcagaataagcaatttaaaagaataaggaaatcatcgtcttatgattac
gaagcacttgatgaagccatgtccatgagtgttgaaatgttaaatgaaaaatttcaagac
tattataaagatctttctgtccttcaaaaggatgttaaggtgccaactaaggtgctttgt
attctttgggatatggagactgaagaagttgaagatatactgcaagagtttgttaataaa
tctctcttattttgtgaccgtaatgggaaatcattccattattatttacatgatcttcaa
cttgacttcctcacagagaaaaatcgcaatcagcttcaggagctgcataaaaaggtagta
aatcaatacaagaaacattataaactacatatacctactccagctcaagaggactgtatg
tattggtgtaactttctagcataccacatggctagtgccaacatgcagaatgaactttgt
gctctcatgttttctctagattggataaaagcaaaaacagagttggtagggcctgcccat
ctgattcatgaatatgtagaatatagccctatattggatcagaaggatagcataatacgt
gaaaactttcaggaatttctctctttaaatggacatcttcttggaaggcagccatttcct
gacattatacaattaggactgtgtcagccagagacttcagaagtgtatcagcaagcgaaa
ctgcaagcgcagcaagaacttgttaaaggagcattttacttggaatgggtaaataaaaaa
tccatgaagaacctctcccgtttggttgtccgaccccatacagatgcagcttaccacgcc
tgcttttccaaagatggacaaagaataacttcttgtggtgctgataaaaccttacaggtg
tttaaaacgaaaagtggagagaaacttttggaaataaaggctcatgatgatgaagtactt
tgttgcagtttctccgcagatgacagatttgtagcaacgtgttcagtggataaaaaagtg
aagatctggaattcaagaactggtcagcttctgcaggtatacaaagaacatgatgaacag
gtcaactgctgccagttcaacaacatggatgatcaacttctcttagccacctgctcaaat
gatacttacatcaaactttgggatttgaacagaaaacattgtcgaaacacaatgtttggt
cacacaaattctgtcagccactgcagattttcaccagatgacagatgtgtggctagttgc
tcagtagatggaactttaaagttttgggatgtgtgttcaggaaatgaactgaaaactatt
gatataaaagaattcttcagaaatgcagatgaacaccaagatgatgtggaagtgttagtg
aagtgttgctcctggtcagcaaattgtactacaataatggtggcagcaaaaaatcggctg
ttacttcttgatgttataaccagtgacttgttagcaaacgtccttataagtcaccatagt
acaatccagtactgtgattattgtcctggcaatcaattggtagcagttgctttatcacat
tattctgttgagttatggaatacagaatcctttgcaaaagtagctgattgtagaggacat
ctgagttgggttcactgtgtgacattttcccctgatggttctttatttctgacatcatca
gatgaccagacaataaggatttgggagtcaagtaaggtgtgcaagtcctctgctgttgtg
ttaaaacgtgaactagatgtcgtgtttcaggaagataaagttgtggttttagcaattctc
aatcagaagcatctacaactaattaatggaaatacaggccatactgagtatctgactgaa
gcccaggaatcacctatttgctgctgttgcctaagtgaagatcttcaatatgcggcattt
ggagaggagaatggaacagtaaaggttttggaattgtctaataggagagttttcaaatcc
agtactggtcatgagaaatctgtacaacattgccagtttacatctgatggacagaccctt
atttcaagctctgatgattcaactatacaggtatggaattggcagtcagaagaatatata
tttttaaaaggtcacaaggaagcagtgaagaattttaggcttttggaaaattcaagactt
ctttcttggtcatttgatggaacagtcaaggtgtggaatatctgtaatggaaaaatagaa
gatgatttagtttgccatgaggatgctgttctttcttgtgccgtttcgcttgatgccacc
aaattttcatctacttctgctgacaaaactgccaagatatggagctttgaaagttcatca
gttcttcatgagcttattggtcacaaaggctgcgtgcggtgctgcactttttccttcgat
gataaattcttggccactggagatgacaatggagaaataaggatttgggatgtctcagga
ggtgaattacttcatctctactcccctgttaccgtagatggaggagaatcaacacatggt
ggctgggtaacagacctctgtttttctcctgacagtaatatgcttgtgtcatgtggagga
tatcttacgtggtggaatataatgactaaagaacctttacaaacattctacacaaatgga
actaacctcaagtcgatatgtgtgtctcctagtttcaaaatatatgtgaccattgataac
cttggtattctttatgtgctacagatgatggaataa

DBGET integrated database retrieval system