Pelodiscus sinensis (Chinese soft-shelled turtle): 102452622
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Entry
102452622 CDS
T02980
Symbol
SMG6
Name
(RefSeq) LOW QUALITY PROTEIN: telomerase-binding protein EST1A
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102452622 (SMG6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pss03019
]
102452622 (SMG6)
03032 DNA replication proteins [BR:
pss03032
]
102452622 (SMG6)
Messenger RNA biogenesis [BR:
pss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
102452622 (SMG6)
mRNA cycle factors
Common to processing body (P body) and stress granule
102452622 (SMG6)
DNA replication proteins [BR:
pss03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
102452622 (SMG6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Motif
Other DBs
NCBI-GeneID:
102452622
NCBI-ProteinID:
XP_014426439
Ensembl:
ENSPSIG00000006660
LinkDB
All DBs
Position
Unknown
AA seq
1395 aa
AA seq
DB search
MFSSEQENMKELKEPRHRKDNRRPDLEIYKPGLSRLRNKHTLLKQETSAYEETRSEESKD
DIASDKDPIVTGGGSQVTGDLSKSDNQKQNGPSQGNGEMESKTVFQGQESLHKHSLPEEW
CPRIIRRTKKPDQQIYQPGKRLQTVAREPASQPASDEIISKMEQLKAEGDEETERDIGKG
SNSRRTKLNKEEREGSLISEGMKTTRGEKGKRVERLDRARKSSDDVIQGTLGSTKRYSRS
DKRRSRYRTCSTSSAGSNNSADGTPFSDGGKKRQERAKERSHPRKQLSASSTDSLEDDRI
GETEAYDTNRNSERKRAEQSRASKGENDWSSNGKEIKGALRVTFDNKTMNRDICVAYTDK
TKPPKAFNVSDSIEALEVKGREPQGRGRGILILPANTDLSANAAGSPESTQSGPRLLLGS
GVSKGLRGRGRGGTMRRLWDPNNPDQKPALKSQTSQLHFLDTDDEVSPTSWGDARQSQAS
YYKFQNSDNPYYYPSPKGQGPPYPYGGYALQYQMGPNNSVYPGAYYPGYAGQSGPYVCSP
LPPTPLSPEMEQQMRNLQQQELSKFLREAGNQEQQLSNLLSRDRISPEGLEKMAQLRAEM
LQLYERCILMDIEFSDNQNVDQLLWKNAFYQVIEKFRQLLKDPLGEDSQELRNKLLQLLD
EGTVFFDSLLQKLQVSYQFKLEDYMDGMAIRSKPLRKMVKYALISAQRCMICQGDICRYR
EQANDTANYGKARSWYLKAQHIAPKNGRPYNQLALLAIYTRRKLDAVYYYMRSLAASNPI
LTAKESLMSLFEETKRKAEQVEQKQHQMLELSPSRWGKGKKSTFRQVGDDATRLEIWIHP
SHPRCSQGHESGRDSEQDNGLGNLSPSDLNKRFILSFLHAHGKLFTRIGMESFPAVAEEV
LRKFQVLLQHSPAPIGSTRMLQLMAINMFAVYNSQPKECLSEDCRSVLQEQATALGLCMF
AQLVRRCTGLLQESARVRPQEAGQEEDLKVSALPQDLKELLPSVKIWSDWMLGHSDTWNP
PPTSLELPTQVSVDVWATLADFCNILTTVNQSEVPLYKDPDDDLSLLSLEEDQLLSGFVP
LLVAPQEPCYVEKTSDKVIAADCKRVTVLKYFLEALCGQEEPLLAFKGGKYVSVAPVPDA
MGKEMGSQEGKQLEDQEDDLRVEAFEDDSEADASGEEFDIRELRARKQALARKVAEQQRR
QDKIQAVLKDQSQMRQMELEIRPVFLVPDTNGFIDHLNSLKKLLEGRKFILVVPLIVINE
LDGLAXEVEHRAGGHTRLLQEKARRAIEFLEQRFESRDSCMRALTSRGNELESISFRSED
TTGQQGSNDDLILSCCLHYCNDKAKDFMPTNKDDPIRLLREVVLLTDDRNLRVKALTRNV
PVRDIPTFLKWAQEG
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgttttcttctgagcaagaaaacatgaaggaactgaaggagcccaggcatcggaaagat
aaccggcgtccagaccttgaaatctacaagcctggcctctccaggctcaggaacaaacac
acactattaaaacaggaaacctcagcgtatgaagagaccagatctgaggaatccaaggat
gacattgctagtgacaaagatcctattgttaccggagggggatctcaggtcactggagac
ctcagcaaaagtgacaaccagaagcagaatggtccttcccagggaaatggagagatggaa
agtaaaactgtttttcaggggcaagagagtttacataaacactctctcccagaagagtgg
tgtcccaggatcatcaggagaaccaagaagccagaccagcagatttatcaacctgggaaa
cgcctgcagactgttgccagggaaccagccagtcagccagctagtgatgaaatcatcagt
aagatggagcagctgaaagctgaaggagatgaggagaccgaaagggacattgggaaaggc
agcaacagcaggagaactaaactgaacaaagaggagagagagggaagccttattagtgag
ggaatgaaaaccacaaggggagaaaagggaaagcgggtagagcggcttgacagagccagg
aaatcaagtgatgatgtgatccaggggacactgggttccacaaagcgatactctcgttct
gacaaacggaggagccgataccgcacctgtagcacaagctcagcagggagcaacaacagt
gcagatggaactccattctctgatgggggaaagaagcgacaggagcgggccaaagagaga
agccaccctagaaaacagctctctgcttcctccactgattctttggaagatgacagaatt
ggggagactgaagcttatgacaccaacaggaattcagagagaaaacgtgcagagcagagc
cgagcttctaaaggggagaatgattggagcagcaatgggaaggagatcaaaggagcccta
cgcgtcacctttgataacaagaccatgaatagagacatttgtgtggcgtatacagacaag
acaaagcctccaaaggcttttaatgtaagtgactccatagaggctttggaggtgaagggc
agggagcctcaagggagaggccgtgggattctcatcctgcctgccaacacagacctctct
gccaatgcggcaggctctcccgagtctactcagtctgggcccaggctcctgcttggcagt
ggtgtcagcaaggggctgagaggcaggggccgtggaggcaccatgcgcagattgtgggat
ccaaacaacccagaccaaaaacctgctctgaagagtcagacctcacagcttcattttcta
gatactgatgatgaagtgagccctacttcctggggggatgcacgccaatcccaggcctcc
tactacaaatttcagaactctgacaacccctattattaccccagtccaaaaggccaaggt
cctccgtatccctatggagggtacgctttgcaatatcagatgggccccaataacagtgtt
tacccaggagcttactaccctggatatgcaggccagtcagggccgtatgtctgcagtccc
cttccccctacccctttgagtcctgagatggagcagcagatgaggaacttacagcagcaa
gagctcagcaaattcctccgagaagctgggaaccaggaacagcagctcagcaacctgctc
tccagagaccgcatcagtcctgagggtcttgagaagatggcacagctgagagcagagatg
ctgcagttgtatgaacgatgcattctaatggatattgagttctccgataaccagaatgtg
gatcagctgctctggaagaacgccttctatcaggtgattgagaaattccggcagctcctg
aaggatccacttggggaggactctcaggaacttcggaacaaactgcttcagctgctggat
gagggcacagttttctttgacagcttacttcaaaagctgcaggtgtcatatcagttcaaa
ctggaggattatatggatgggatggctattcgcagcaaacccttgcggaagatggtgaag
tacgcactgatcagtgcccagaggtgtatgatttgccaaggggacatttgcaggtacagg
gagcaagcaaacgacacagcaaactacgggaaagcacgcagttggtatctgaaggctcag
catattgctcccaaaaatggccgtccgtacaatcagttggctctgctggctatctacacg
aggaggaagctggatgctgtgtactactacatgcgcagcctggctgccagcaaccccatc
ctcacagccaaggagagcctcatgagcctgtttgaagagacaaaacgcaaggctgagcag
gtggaacagaagcagcaccagatgctggaactcagccccagccgatggggaaagggcaag
aaatccacattccgacaagttggagacgatgccactcggctggagatctggattcatcca
tcccacccccgctgctcccagggccatgagtctggcagggattcagagcaggacaacggt
cttgggaacctcagccccagtgatctgaacaaaaggttcatcctcagttttctccatgcc
catgggaagctgtttaccaggattgggatggagtcgttccctgcggtggcagaggaagtc
ctgaggaagttccaggtgctgctgcagcacagccccgcgcccattggaagcacccgaatg
ctgcaacttatggctatcaacatgtttgcagtgtacaactcccagcccaaagagtgcctc
tcggaggactgccgctcggtgctccaggagcaggccacggcactgggcctctgcatgttc
gcccagctggtgaggcgctgcaccgggctgctgcaggagtccgcccgagtgaggccccag
gaagcagggcaggaggaggatctcaaggtctccgccttgccccaggatctgaaggagctg
ctccccagcgtgaaaatctggtcagactggatgctcggccactcggacacctggaacccc
cctcccacctccctggagctgcccacacaggtctcagtggacgtgtgggcgacactggct
gacttctgtaacatactgaccacggtgaatcagtcggaggtgccgttgtacaaagacccc
gatgatgacctttccctgctcagcctggaagaggatcagctcctttcgggcttcgtcccc
ctgctggtcgccccccaggagccctgctacgtggagaaaacctcggacaaggttattgca
gccgactgcaagagggtcacagttctgaagtatttcctggaagccctttgtggacaagaa
gagcctttgctggcattcaagggtggaaaatatgtgtcagtggcacccgtcccagacgcc
atgggaaaggaaatgggaagccaagagggaaaacaactggaagatcaggaggatgacttg
agggtcgaggcgtttgaagacgattcggaggctgatgccagtggagaagagtttgacatc
agggagctcagagccaggaaacaagcgctcgccaggaaagtggctgagcagcagcgacgt
caggacaagattcaggccgtgctgaaggatcagagccagatgcgacagatggagctggag
atccgacctgtcttcctggtgccagacaccaatggcttcatcgaccacctgaacagcctg
aagaagctgctggaggggcggaaattcatcctcgtggtgcccctgattgtgatcaatgag
ctggatggcctggccnnggaagtggagcaccgggccgggggccacacccgcttgctgcag
gagaaagcccggagagccatcgagttcctggagcagcgctttgagagccgcgacagctgc
atgcgggctctgacgagccgaggcaacgagctcgagtccatctccttccgcagcgaggac
accaccggccagcagggcagcaacgacgacctgattctgtcctgctgtctccattactgc
aatgacaaggccaaggacttcatgcccaccaacaaagacgacccgattcgtctgctccga
gaggtggtgctgctcacggacgatcggaacctgcgtgtcaaggcgctgacccgcaacgtg
ccggtgcgcgacattcccaccttcctgaagtgggcccaggagggctga
DBGET
integrated database retrieval system
