Pelodiscus sinensis (Chinese soft-shelled turtle): 102452799
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Entry
102452799 CDS
T02980
Symbol
RAPGEF6
Name
(RefSeq) rap guanine nucleotide exchange factor 6
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102452799 (RAPGEF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RA
RasGEF_N
cNMP_binding
PDZ
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
102452799
NCBI-ProteinID:
XP_014425506
Ensembl:
ENSPSIG00000005204
LinkDB
All DBs
Position
Unknown
AA seq
1634 aa
AA seq
DB search
MTSPVDPKIKQALQKKTSERTQEDLNTIYYYLHGMDILSHLREHQLRIMSSSARYERYEG
NQVLFCSETIARCWYILLSGSVLMKDSMFLPPRSFGKQSGGKRGCECIILEPSEMIVVEN
SKDNEENILQREVPLRQSRRRFRKINQRGERQTITDHVDASSYLSLPADLTKMHLTDNPH
PQVTHVPSSQSGCSIASDSGSSSLSDIYQATESDMGDVDLTGLPEAPVDSEDDEEEDEDI
DRTSDPLLGRDVVRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFE
VVEQAGAIILEDGQELDSWYVILNGTVEISYPDGKTESLCMGNSFGITPSLDKQYMNGVV
RTKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVKEHRELDRSGTRKGHIVIKA
TPERLIMHLIEEHSIVDPTYIEDFLLTYRTFLSSPLEVGDKLLEWFRVDSLRDKVTRVVL
LWVNNHFNDFEGDPAMTRFLEEFEKNLEDTKMRGHLRLLNIACAAKAKWRQITLQKPSRD
SPLFFCLVGGSEKGFGIFVETVETGSKAAEAGLKRGDQVMEVNGQNFENITFVKALEILR
NNTHLSITVKTNIFVFKELLSRLGQEKNGVPHIPKIAEKKSNRYSIPDMPGDMEQIFPCE
KGNKKIKANTVSGGRNRIRKILDKTRFSILPPKLFSDGSVSQSQDDSIVGTRQCRHSLAI
MPIPGTLSSSSPDLLQPTTSMLDFTNPSDIPDQVIRVFKADQQSCYIIISKDTTAKEVVS
HALHEFNLTGAPETYSLCEVSVSPEGVIKQRRLPDQFSKLADRIQLNGRYYLKNNMETET
LCSDEDAQELLRESQISLLQLSTIEVATQLSMRDFELFRNIEPTEYIDDLYKMDSKTGNT
HLKQFEDVINQETFWVATEILTEPNQLKRMKIVKHFIKIALHCRECKNFNSMFAVISGLN
LAPVARLRGTWEKLPSKYEKHLRDLQDLFDPSRNMAKYRNILSSQSMQPPIIPLFPVVKK
DITFLHEGNDSKVEGLVNFEKLRMIAKEIRQVVRMTSANMDPAVMFRQRKKRWRSLGSLS
QGSTNSNMLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLSNLNVETDEEKFQIM
SLQCEPAYSTLTKNLSERRCTKSSEMSPIPMRSVGQTTKAHLHQQNRMSQVLQVPAVNLY
PIRKRGPAKDHVTFSTGSPQKSLSLSEEVSKKQAEDSISMTSSFHSSPPASPQGSPHKVA
NIQRSDNCGPMNLSGSSSSLASETSNKNCGPRSYGIGYALIPSTKSDNFSDSSHSEISSR
SSIVSNCSADSMSAALQDERCLPHEYSQPTTGWSLTRPAIVRGMAVTSSMSSEEISHEHI
TIEAADSGRGSWTSCSSSSHDNFQNIQNQKSWDLLNSYRHTHLDGPIAEVEPTHCHPEES
YLYSEAFSKNNRQSKASTEHDQSRQSWASSSSLSDTYETNYGTIKRRELERSAAEQTEVL
DSKPATDANYKTVTSSTEKGLIVYCVTSPKKDDRYREPPPTPPGYMGISLADIKEGSPHH
PHLKPPDYSVAVQRSKMLPSDLSRLSSASLSSEPVACMSSKMPQWHKRQPSHPKLADMTD
ADSEEDEDEQVSAV
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atgacctctcctgtggatcccaagattaaacaggctttgcagaaaaaaacatcagaaagg
actcaagaggacttaaatactatctattattatcttcatggaatggacatattgtcacat
ctcagggaacatcagctaagaataatgtcttctagtgctcgttatgaaagatacgaaggc
aaccaagtccttttttgttcagaaactattgcgagatgttggtatattcttctttctgga
tctgtccttatgaaggactccatgtttttaccaccacgcagttttggcaagcagtctgga
ggaaaaagaggatgcgagtgtattatattggaaccttcagaaatgattgtggtggagaat
tccaaagacaatgaagagaatatcctgcaaagagaagttcccctcaggcaatctcgacga
aggtttaggaagattaaccagcggggggaacgtcagaccatcacagaccatgtggatgct
agcagttacctctcgcttccagcagatcttaccaagatgcatcttacagataatccacat
ccacaggtgactcatgtcccttccagccaatctggatgtagcattgccagtgactcagga
agtagcagcttgtcggatatctaccaggctacagaaagtgatatgggagatgtcgattta
acaggtctcccagaagcccctgtggattctgaagatgatgaagaagaagatgaagatatt
gaccgaacttccgatccattactggggcgagatgttgtacgggaatgccttgagaaagaa
cctgcagacaaaacggatgatgacattgagcaattactggaatttatgcatcaactccca
gcctttgcaaacatgaccatgtctgtaagaagagagctttgttcggttatgatatttgaa
gtggtagaacaagcaggagccatcatacttgaagacggacaagagcttgattcttggtat
gttattttaaatggcacggtggaaatcagctatccagatgggaaaactgaaagtctctgt
atgggaaatagttttgggattaccccttctctggataaacagtacatgaatggagtggtt
aggaccaaagtagatgactgtcagtttgtttgcatagcacagcaggattactggcggatt
ctgaaccatgtggaaaaaaacactcataaagttgaggaagaaggagaaattgttatggta
aaggagcacagagagctggatcgcagtggaaccaggaaagggcacatagttattaaggca
acacctgagcgactcatcatgcatttaatagaagaacattctattgtggacccaacttat
atagaagatttccttttaacatacaggacatttctatcaagcccattggaagttggagat
aaactcttggagtggtttagagtggatagcctcagggataaggtaaccagagtggtctta
ttatgggtgaacaatcatttcaatgattttgaaggagatcccgctatgacacgatttctg
gaagaatttgaaaaaaacttggaagatacgaaaatgaggggtcacctcaggttgctgaat
attgcctgtgctgccaaggcaaagtggaggcaaattacactacaaaaaccatccagagac
tcaccactctttttctgtcttgttggaggaagtgaaaaaggttttggcatttttgtagag
actgtagaaacaggcagcaaagcagcagaagctggacttaagcgtggtgatcaggtaatg
gaagtaaatggacagaactttgagaacattacatttgtaaaagctcttgaaatcttgagg
aacaatactcatctttccattactgtaaaaacaaacatttttgtgtttaaagaacttctt
agcaggctaggacaggagaaaaatggagtccctcatattccaaaaattgcagaaaagaaa
agtaatcgctactccatcccagatatgcctggagatatggaacaaatatttccatgtgag
aaaggaaacaagaaaatcaaagcaaacactgtatctggtggaagaaacagaatcaggaaa
attttagacaagacacgattcagcatcttacctcccaaactatttagtgatggcagtgta
agccagtcacaggatgacagtattgttggaacaaggcagtgcagacacagtctggccata
atgcctatccctggaacactctcgtcaagtagccctgatctgttgcagcctacaaccagt
atgctggattttactaatccttcagatattccagatcaagttataagagttttcaaagcg
gatcagcaaagctgttacattataatcagcaaagacactacagcaaaagaagttgtgagt
catgcactgcatgaattcaacttgacgggcgctccagaaacctactccctgtgtgaggtg
tctgttagtcctgagggagttatcaaacagagaaggcttccagatcagttctccaaatta
gcagacagaatccagctgaacggaaggtattatctgaaaaacaatatggaaacagagacg
ttatgctcggacgaggatgcccaagaactgcttagagagagtcagatatctcttctacag
ttgagtaccattgaggtggccacacagctgtccatgagagactttgaattatttcgaaat
attgagcctactgaatatattgatgacctctataagatggactccaaaacaggaaatact
catctgaaacaatttgaggatgtcattaaccaagagaccttctgggttgccacagaaatt
ttaacagagcccaaccagctcaaaagaatgaagatagttaaacatttcattaaaattgcc
ctacattgtcgagaatgcaagaacttcaattccatgtttgcagttataagtgggctaaat
ctggcgccagtagcacgactcagaggtacttgggaaaagctaccgagcaagtatgaaaag
caccttagagaccttcaagatctttttgatccatctagaaacatggctaagtaccgcaac
attcttagcagtcagagcatgcagcctccaattattccactgtttcctgttgtcaagaag
gatattacatttctgcatgaaggaaatgattcaaaagtggagggcctggtaaattttgag
aaactcagaatgattgccaaagaaattcgacaagtcgtcagaatgacctctgctaacatg
gatccagctgtaatgttcagacaaaggaagaagaggtggaggagtttggggtctctgagc
cagggcagcacaaactcaaacatgcttgatgttcaaggaggggctcataaaaaacgtgct
cgacgcagctcactcctcaatgccaagaagctttatgaggatgctcagatggccaggaag
gtgaagcaatacctttccaatctgaatgtggagactgatgaggaaaaattccagatcatg
tcacttcaatgtgagcctgcatatagcactttgaccaagaatttaagtgagagaagatgt
acaaaatcctcagaaatgtcaccaatacccatgaggtctgttggccaaaccacaaaagcc
catttgcatcaacaaaacagaatgagccaagttctccaagttccagctgttaatttgtac
cctattagaaaaagaggaccagctaaggaccatgtcaccttcagtacaggttctcctcag
aaatcactcagcttgtctgaggaagtaagtaagaagcaagctgaagatagtatatctatg
acatcctctttccactccagtcctcctgcttctcctcagggctctccacacaaagttgct
aacatccagaggtctgacaactgtggtccaatgaatctctctggatcctcctcatcgctc
gccagtgaaaccagcaacaagaactgtgggccacgcagctatggaataggttatgccctc
ataccttccactaaatctgataacttctcagactccagccacagtgagatctcatcccgg
tccagcattgtgagtaactgctctgctgattcaatgtctgcagccctgcaagatgaaaga
tgtttgcctcatgagtatagccagcctaccactggttggtcactcactagacctgcgata
gtcagagggatggctgtcacatcttccatgagcagtgaggagatctctcatgagcacatc
acaatagaagctgcagacagtggccggggaagctggacttcatgctcgagtagttctcat
gataacttccagaatatccaaaaccagaaaagttgggatctcttgaattcttaccgtcac
actcatctagatggacccattgctgaagtggaacccacacactgtcaccctgaagagtct
tatttgtattctgaagccttttccaaaaataacaggcagtcaaaagccagcacagaacac
gatcagtctcggcaaagctgggcttcctcaagttccctgtcagacacatatgaaacaaac
tatgggacaattaaacggagagagctggagcgctctgcagcagagcagactgaagttttg
gactctaagccagccactgatgcaaattataaaactgttacttcaagtacagaaaaaggc
ctgatagtatactgtgtcacctcacctaagaaggacgataggtatagggagcctccgccc
acccctccaggatatatggggatttctttagcggacataaaggaaggatcaccccatcac
ccacacttaaagcctccagactatagtgtggcagtgcagaggtcaaagatgctacctagt
gacctctctagactttcatcagcttctctcagtagtgaaccagtggcctgtatgtcatcg
aagatgcctcagtggcataaacgacagccgtcccatcctaaactagcagatatgactgac
gcagatagtgaagaggatgaagatgaacaagtatcagcagtctga
DBGET
integrated database retrieval system
