KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102458214
Entry
102458214         CDS       T02980                                 
Name
(RefSeq) actin, cytoplasmic type 5 isoform X2
  KO
K05692  actin beta/gamma 1
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03082  ATP-dependent chromatin remodeling
pss04145  Phagosome
pss04210  Apoptosis
pss04510  Focal adhesion
pss04520  Adherens junction
pss04530  Tight junction
pss04810  Regulation of actin cytoskeleton
pss04814  Motor proteins
pss04820  Cytoskeleton in muscle cells
pss05100  Bacterial invasion of epithelial cells
pss05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pss00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102458214
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102458214
  09143 Cell growth and death
   04210 Apoptosis
    102458214
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102458214
   04520 Adherens junction
    102458214
   04530 Tight junction
    102458214
  09142 Cell motility
   04814 Motor proteins
    102458214
   04820 Cytoskeleton in muscle cells
    102458214
   04810 Regulation of actin cytoskeleton
    102458214
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102458214
   05100 Bacterial invasion of epithelial cells
    102458214
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pss03021]
    102458214
   03019 Messenger RNA biogenesis [BR:pss03019]
    102458214
   03036 Chromosome and associated proteins [BR:pss03036]
    102458214
   03029 Mitochondrial biogenesis [BR:pss03029]
    102458214
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pss04812]
    102458214
   04147 Exosome [BR:pss04147]
    102458214
Transcription machinery [BR:pss03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     102458214
Messenger RNA biogenesis [BR:pss03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     102458214
Chromosome and associated proteins [BR:pss03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     102458214
    NuA4 complex
     102458214
  Chromatin remodeling factors
   BAF complex
    102458214
   PBAF complex
    102458214
   GBAF(ncBAF) complex
    102458214
   SWR1 complex
    102458214
Mitochondrial biogenesis [BR:pss03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    102458214
Cytoskeleton proteins [BR:pss04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     102458214
Exosome [BR:pss04147]
 Exosomal proteins
  Proteins found in most exosomes
   102458214
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 102458214
NCBI-ProteinID: XP_006128091
Ensembl: ENSPSIG00000001500
LinkDB
Position
Unknown
AA seq 376 aa
MADEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS
YELPDGQVITIGNERFRCPEAIFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVL
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggccgatgaggaaattgccgccctcgttgtcgacaacggctccgggatgtgcaaggcc
ggctttgctggggacgatgccccccgagccgtgttcccctccatcgtggggcgccccagg
caccagggggtcatggtgggcatggggcagaaggacagctacgtgggcgacgaggcccag
agcaagagaggcatcctcaccctgaagtatcccatcgagcacggcatcgtcaccaactgg
gacgacatggagaagatctggcaccacaccttctacaacgagctgcgggttgcccccgag
gagcaccccgtcctgctcaccgaagcccccctgaatcccaaggccaaccgggagaagatg
acgcagatcatgtttgagaccttcaacaccccggctatgtacgtggccatccaggccgtg
ctgtccctgtacgcctccggacgaaccaccggtatcgtcatggattccggggacggggtc
acccacacggtgccgatctacgagggctacgccctgcctcacgccatcctgcgtctggac
ttggccggccgggacctgaccgactacctcatgaagatcctgaccgagaggggctacagc
ttcaccaccacggccgaaagggaaattgtgcgcgacatcaaggagaagctctgctacgtc
gccctggacttcgagcaggagatggccacggccgcttcctcttcctccctggagaagagc
tacgagctgcctgacgggcaggtgatcactattggcaacgagaggttccggtgccccgag
gccatcttccagccctccttcctggggatggagtcctgtggcattcacgagaccactttc
aactccatcatgaagtgtgacgtggatatccgaaaggacctctatgccaacaccgtgctg
tccggcgggaccaccatgtatcctggcatcgctgaccgaatgcagaaggagatcacggcc
ctggcacccagcactatgaaaatcaagatcattgccccgccagagcgtaaatactccgtc
tggatcggtggctccatcctggcttctctctccaccttccagcagatgtggatcagcaag
caggagtacgatgagtctggcccatccattgtccatcgcaagtgcttctaa

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