Pelodiscus sinensis (Chinese soft-shelled turtle): 102458367
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Entry
102458367 CDS
T02980
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pss04040
]
102458367
Ion channels [BR:
pss04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102458367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
102458367
NCBI-ProteinID:
XP_025040014
LinkDB
All DBs
Position
Unknown
AA seq
1792 aa
AA seq
DB search
MAVPPHVPGPDNLRPFTRESLAAIERRISEAEALRIKRQHVEVLDEEELKASPNLEVGKP
LPRIYGDLPAELVGVPLEDLDPFYGDKKTFIVLNKGKAIFRFTATPALYVLGPFNPLRRG
AIKVLIHSYPFLTQAGVSHRAQLAFSQFCSSYLSCKHLPPFPQVLPAPARPATVSASRYT
FTGIYTFESLIKIAARGFCIDQFTFLRDPWNWLDFSVIVMAYTTEFVDLGNVSALRTFRV
LRALKTITVIPGLKTIVGALVQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRW
PPPINGTLPEDFFGMDNDTFANATLDSNSTGLSNGTFDWDSYIHDEGNFYFLEGALDALL
CGNSSDAGRCPEGYTCMKAGRNPNYGYTSYDTCSWAFLSLFRLMTQDYWENLFQLTLRAA
GKTCMIFFVVVIFLGSFYLINLILAVVAMAYAEQNDATMLEEQQKEQEFQQLLEQLKKHQ
EEQEKVLQDRKLSSSAAEKTGGPVANSHGKSTGCNGNVESEEPSPRDGQDQPDPDGLAGP
GLQQRAESAVSIISNAMEELEEAHQKCPPWWYKFAHTFLVWDCCPLWLKLKALVRLIVMD
PFVDLGITICIVLNTLFMAMEHYPMTEEFENVLTVGNLVFTGIFTAEMVLKLIALDPYEY
FQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSV
GALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKISQDCTLPRWHMHDFFHSFLIIFRI
LCGEWIETMWDCMEVAGQPMCLVVFLMVMVIGNLVVLNLFLALLLSSFSADSLAASDDDG
EMNNLQIAIGAIDFVKRTALALLHLPWKEKQEPAEEQEDSKKDNFVLNHACSGQEPPGEG
RDGSAGKGPRFGDELDHMNFIHNPHLTVQVPIASEESDLYDEETSTQSDTEGPKVGRQAG
PGPASSSPTAAPGKACVRRCPFLYVDITTDKGKIWWNLRKTCFQIVEHNWFETFIIFMIL
LSSGALAFEDIYIEQRKVIRTMLEYADKVFSYVFVLEMLLKWVAYGFKVYFTNAWCWLDF
LIVDVSRLLAHGAGKSLSAERALHRHRQASGQRXXXNALLGPLPSIMNVLLVCLIFWLIF
SIMGVNLFAGKFYRCVNTTTDELFHISLVNNKSDCLALLHTGQVRWLNVKVNFDNVGLGY
LSLLLGTGAPGTAPFPSLALRTQEIEEQPLYETNLYMYIYFVIFIIFGAFFTLNLFIGVI
IDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKCQGLVFDFVTKQA
FDIIIMILICLNMVTMMIETDDQSPTKINILYNINLIFIVVFTGECVLKMFALRYYYFTI
GWNIFDFVVVILSIGGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFA
LMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKESGIDDIFNFETFGNSIICLFQITT
SAGWDGLLNPILNSGPPDCDPSLENPGSSVKGDCGNPSIGICFFCTYIIISFLIVVNMYI
AIILENFNVATEESSEPLCEDDFEMFYETWEKFDPDATQFIAYSVLSDFVDTLQEPLKIA
KPNKIKLITMDLPMVVGDKIHCLDILFALTKEVLGDSGEMDGLKATMEEKFMAANPSKVS
YEPITTTLKRKNEEVCAIKIQRAFRRFMLKRSLKQASYLYRHSQEEGAFAEGAPEKQGLI
ADKMNEIYGNSGAHVETTPPLALAPVASPETRAAPGEERKREGERAVKESLV
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcccgccacacgtacccggccccgataacctccgccccttcacccgcgagtcc
ctggctgccatcgagcggcggatcagcgaggcggaagcgctgaggatcaagcggcagcat
gtggaggtgctggatgaagaggagctgaaggccagccccaatctggaggttgggaaaccc
ctcccccgcatctacggggacctgccggcggagctcgtcggggtgcccttggaggacctg
gaccccttctacggcgataagaagacattcatcgtcctaaacaaaggaaaagcaatcttc
cggttcaccgcgaccccggccctctacgtgctgggacccttcaaccccctccggagaggt
gccatcaaagtgcttatacactcatatcctttcctaactcaggcaggagtaagtcaccgg
gcccagctggcattcagccagttctgcagctcctacctctcctgcaaacacctaccgcca
ttcccgcaggttctccctgcccctgcccgtcctgccactgtctctgcttccaggtacacc
ttcaccgggatctacaccttcgagtccctgataaagatcgccgccagagggttctgcatt
gaccaatttacattcctccgggatccatggaactggctggatttcagtgtgatcgtgatg
gcctacaccacagagtttgtggatctgggaaacgtctcggccctgcgcacgttccgtgtc
cttcgcgccctgaaaaccatcaccgtgattccagggctgaagacgattgtgggagctttg
gtacagtctgtgaagaagctctcggacgtcatgattctcaccgtgttctgtctgagtgtt
ttcgcgctgattggccttcagctgttcatggggaaccttcggcagaaatgcgtcaggtgg
ccgcctcccataaacggcactttgccagaggacttcttcggaatggacaacgacacgttt
gctaacgcgacgctggacagcaacagcacggggctgagtaacggcactttcgactgggat
tcctacatccacgacgaagggaacttctactttctggagggcgcgctggatgctctgctc
tgcgggaacagcagcgacgccgggaggtgccctgaaggatacacgtgcatgaaagcaggg
aggaatccgaactatggctacaccagctatgacacctgcagctgggccttcctttctctc
ttccgcctcatgactcaggactactgggagaatctcttccagctgaccctgcgcgccgcg
gggaaaacttgcatgatcttctttgtggtggtgatcttcctgggctccttctacctcatc
aacctcatcctggccgtggtggccatggcctacgccgagcagaacgacgccaccatgctg
gaggagcagcagaaagagcaggagtttcagcagctcctggagcagctgaagaagcaccag
gaggagcaagagaaagtgttacaagaccgtaagttgagcagcagcgcagcggagaagacg
gggggccctgtggctaacagccacggcaaatccacaggctgcaacgggaacgtggagtcc
gaggaaccaagcccccgcgatgggcaagaccagcctgatcccgatgggctggcggggcct
ggtctccagcagcgcgcggagagcgccgtcagcatcatctccaacgccatggaagagctg
gaggaggctcaccagaagtgcccgccctggtggtataaattcgcccacaccttcctggtc
tgggactgctgccccctctggctgaagctgaaggccttggtgcggctgatcgtcatggac
ccgtttgtcgacctgggcatcacaatctgcatcgtgctcaacacgctcttcatggccatg
gagcactaccccatgaccgaggagtttgagaacgtgctgacggtggggaacctggtcttc
accgggatcttcacggcggagatggtgctgaagctcatcgccctggacccctacgagtac
ttccagcagggctggaacatcttcgacagcatcatcgtcaccctgagcttggtggagctg
ggcctggccaacgtgcagggcctctccgtgctccgctccttccgcctgctgagagttttc
aagctcgccaagtcctggccaaccctcaacatgctcataaagatcatcggcaactctgtg
ggtgctctgggaaacctcaccctggtactggccatcatcgtcttcatcttcgccgtggtg
ggcatgcagctgtttgggaagagctacaaggagtgcgtgtgcaagatctcccaggactgc
acgctgccccgctggcacatgcacgacttcttccactccttcctcatcatcttccgcatc
ctgtgcggggaatggatcgagaccatgtgggactgcatggaggtggctggccagcccatg
tgcctcgttgtcttcttgatggtcatggtcatcgggaatctcgtggtcctgaacctgttc
ctggccttgctgctgagctccttcagcgccgacagcctcgcggcctccgacgacgacggc
gagatgaacaatctgcagatcgccataggggcgatcgacttcgtcaagagaacggcgctc
gcgctgctgcacctgccgtggaaggagaagcaggagccggcggaggagcaagaggacagt
aagaaagacaactttgtgctcaaccacgcgtgctcgggccaggagcccccaggggaaggc
agggacggcagcgccgggaaagggccgcgcttcggggacgagctggaccacatgaatttc
atccacaacccccacctgactgtgcaagtgcccatcgcctccgaggagtccgacctgtac
gacgaagaaacgagcacccagtcggacacggaaggccccaaggtaggcaggcaggctggg
ccagggcctgccagcagctctcctacggcagcgccgggaaaggcctgcgtgcgacgctgc
cctttcctctatgtcgacatcacaaccgacaaggggaagatctggtggaaccttcggaaa
acctgtttccagattgtcgagcacaactggttcgagaccttcatcatcttcatgatcctc
ctgagcagcggagccctggctttcgaagacatctacatcgagcagcggaaggtgatccgc
accatgctggagtacgccgacaaggtcttctcctacgtcttcgtcctcgagatgctgctc
aagtgggtggcctacggcttcaaggtgtatttcaccaacgcctggtgctggctggatttc
ctcatcgtggacgtaagtcgcctcttggcccatggcgcaggaaagagcctctccgcggag
cgcgctctgcaccgccaccggcaggcgtctgggcagcgnnnnnnnnngaatgccctgctg
ggccccctcccctccattatgaacgtcctgctggtctgcttgatcttctggctgatcttc
agcatcatgggggtgaacctgtttgcggggaagttctaccggtgcgtcaacaccaccacc
gacgagctcttccacatcagcctggtgaacaacaagagcgactgcctggccctgctgcac
accggccaggtgcgctggctcaacgtcaaggtcaacttcgacaacgtgggcctgggctac
ctctccctgctgctcggcaccggcgcccccggcacggctccgttccccagcctggcactt
cgaactcaggaaatcgaagagcagccgctgtatgagaccaacctctacatgtacatctac
ttcgtcatcttcatcatcttcggcgccttcttcaccctcaacctcttcatcggtgtcatc
atcgacaacttcaaccagcaaaagaaaaagtttggagggaaggacatcttcatgacggag
gagcagaagaaatactacaatgcaatgaaaaagctgggatccaaaaaaccacaaaaacct
atacctaggccagggaacaaatgtcaggggctggtgttcgacttcgtgaccaagcaggcc
tttgacatcatcatcatgatcctgatttgtctgaatatggtgaccatgatgattgaaacc
gacgaccaaagccccaccaagatcaacatcctctacaacatcaacttgattttcatcgtc
gtcttcactggcgagtgcgtgctgaaaatgttcgccctgcgctactactacttcaccatc
ggctggaacatcttcgacttcgtggtggtcatcctgtccatcggaggtatcgtcctctcc
gacatcatagagaaatactttgtgtcccccaccctcttcagggtgatcaggctggcaaga
attgggcgcgttctgcggctgatccgaggcgcaaaagggatccggacgcttctgtttgct
ttgatgatgtctctcccagctctgttcaacatcggcctcctgctcttcctggtcatgttc
atctactccatcttcgggatgtccaacttcgcctacgtcaagaaggagtctgggatcgac
gacatcttcaatttcgagaccttcgggaacagcatcatttgtttgtttcagatcacaacg
tcggctggctgggacggcctcctcaaccccatcctgaacagcggcccaccagactgtgac
cctagcttggagaacccgggcagctcggtgaaaggagactgcggcaacccgtctatcggc
atctgcttcttctgcacctacatcatcatctccttcctgatcgtggtgaacatgtacatc
gccatcatcctggagaacttcaacgtggccacggaggagagcagcgagccgctctgcgaa
gacgactttgaaatgttctatgaaacgtgggagaagttcgacccagacgccacccagttt
atcgcctacagtgtgctgtcggattttgtagacaccttgcaggagcccctcaagattgcc
aagccgaacaagattaaattgatcaccatggatttaccgatggtcgtcggagataaaatc
cactgcctggatattctctttgcgctgactaaggaggtgctgggggactcgggggaaatg
gatggtttgaaagccacgatggaggagaagttcatggctgccaatccgtccaaggtttcc
tacgaacccatcacgacgacgctgaaaaggaaaaacgaggaagtgtgtgccataaaaatc
caaagagccttccgacggttcatgctaaagcggtcgctgaagcaggcgtcctacttgtac
aggcacagtcaagaggagggcgcctttgcagagggggcgccggaaaaacaagggctgatc
gcagacaaaatgaatgagatttatgggaacagcggtgcacacgtggagacaaccccgccc
cttgcccttgcaccagttgcaagcccagagactagagcggctcctggcgaggagagaaaa
cgggagggggagcgagcggtgaaagagtcgttagtataa
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integrated database retrieval system
