Pelodiscus sinensis (Chinese soft-shelled turtle): 102460895
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Entry
102460895 CDS
T02980
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X2
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04010
MAPK signaling pathway
pss04020
Calcium signaling pathway
pss04510
Focal adhesion
pss04518
Integrin signaling
pss04519
Cadherin signaling
pss04540
Gap junction
pss04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102460895 (PDGFRB)
04020 Calcium signaling pathway
102460895 (PDGFRB)
09133 Signaling molecules and interaction
04518 Integrin signaling
102460895 (PDGFRB)
04519 Cadherin signaling
102460895 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102460895 (PDGFRB)
04540 Gap junction
102460895 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
102460895 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pss01001
]
102460895 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pss04090
]
102460895 (PDGFRB)
Enzymes [BR:
pss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
102460895 (PDGFRB)
Protein kinases [BR:
pss01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
102460895 (PDGFRB)
CD molecules [BR:
pss04090
]
Proteins
102460895 (PDGFRB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
ig
VEGFR1-3_N_Ig-like
I-set
Ig_2
V-set
C1-set
Ig_VEGFR-1-like_5th
VEGFR-1-like_Ig-like
Peptidase_M50
Motif
Other DBs
NCBI-GeneID:
102460895
NCBI-ProteinID:
XP_075756656
Ensembl:
ENSPSIG00000013306
LinkDB
All DBs
Position
17:complement(34947283..35022621)
Genome browser
AA seq
1122 aa
AA seq
DB search
MGRVNIHLSPARADRQRRGHCCQGGRGLQCSGTPAMLPPSLKMLLLVLAGLPATASTGTT
LRISPSDPEVVLPLSSNFSLTCSGEAEVIWERDMQPIAASPEQRDGTFTSTLTLWDVTGL
DTGEYACSYNHSQKPMERKAVYVFVPDPSLVFLPPGPEDSFIFIIGSSEATIPCRVTDPQ
ATVTLYEKKVKIPIPADYDRQQGFKGFFEDKTYICSVTLGEREVHSDPYYVYRIQVSSLN
VSIGAVQTMVKRGENITVMCTVSDNEVVDFSWSYPRKEAGKAVEPVTDFLPGSSYEIRSI
VTIQDAELEDAGTYSCHVSEVSHQNKDRKDIEIRVIERGFVRFHTGLTDVELAEVHKSHT
IQVQLEAYPPPTILWLKDNETLRVGNSSEFAITSKSLSETRYQTTLTLVRVKQKEGGFYT
VRVSHEDDTQELSFYLQINVPAKVLLLKENSNTSSGEQTVTCATEGMPEPELSWFTCSDI
KGCGSQEQPTRLLGNSSEEINLQTGTVYHEALKVYQVNSSLRLRSMDERRLIRCSVQNLL
GSDYQDITLAPHAFPFKVVLISGILALVVLAVVFLAILVIVWKKVRKPRYEIRWKVIESV
SSDGHEYIYVDPMQLPYDCSWELSRDKLVLGRTLGSGAFGRVVEATAHGLSHSQSVMRVA
VKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDY
LLRNKHTFLQYYTEKARREMEVYGNVSEEEKVYSLAFAVESDGGYMDMSKDESLDYVPMS
DMKGELKYADIDPSNYGTPYELDSYSPSAPDQTDRVTLINESPLLSYTDLVGFSFQVANG
MEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPE
SIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMSKPTHASNEI
YDIMQKCWEEKFEIRPSFSQLVVLMGNLLADTYKKRYQQVEEEFLKSDHPAVLRTRPRIP
GVSSAEFPPSPGSVLYSAVQQDGGDNDYIIPLPDPKPDGIDDGPQEASISRASSMLNEAN
TASTISCDSPLDPQQEEEQAPEPKSGCQEPNPEHHTMEESFL
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgggaagagtcaatatccacctctcaccagccagagcagatagacaaaggagaggccac
tgctgccagggaggacgtggcctgcagtgcagtggaacccccgccatgctgcctccatcc
ctgaagatgctcctcctcgtcctcgcaggtttgcccgccacggcctccacaggcaccacg
ctgcgcatttcgcccagcgaccccgaagtcgtcctccctctctcaagcaacttttcactg
acgtgctcgggggaggccgaggtgatctgggaacgagacatgcagcccatcgccgcctcg
cccgagcagcgggacggcaccttcaccagcacgctcacgctctgggacgtgacgggcctt
gacacgggggagtacgcctgcagctacaaccactcccagaagcccatggagaggaaggcc
gtctatgtctttgtgccagacccctccttggtcttcctcccccccggccccgaggactcc
ttcatcttcatcatcggctccagcgaggccaccatcccgtgccgcgtgaccgaccctcag
gccacggtgactctctatgagaagaaggtcaagatcccgattcccgcagactatgacagg
cagcaaggtttcaaggggttcttcgaggacaagacctacatctgcagcgtgacgctgggc
gagcgggaggtgcactccgacccgtattatgtctacagaatccaggtctcctccctgaac
gtttccatcggggcagtgcagaccatggtgaagcgaggcgagaacatcacagtgatgtgc
accgtgagcgacaacgaagtggtcgacttcagctggtcttaccctcgcaaggaggcgggt
aaggctgtggagccggtgacagacttcttgcccggatccagctatgaaatccgctccatc
gtcaccatccaggacgcagagctggaggacgctggcacctacagctgccacgtctccgag
gtctcccaccagaataaggacaggaaggacattgagatccgcgtgatcgagcgcggcttt
gtgaggttccacaccggcctgaccgacgtcgagctggccgaggtgcacaagagccacacc
atccaggtgcagctcgaggcctatccgccgccaaccatcctgtggctgaaggacaacgag
accctgagggtggggaacagcagcgagttcgccatcaccagcaagagcctgtcagaaacc
aggtaccaaaccactctgaccctggtgcgggtgaagcagaaggaaggggggttctacacc
gtccgggtgtcccacgaagacgacacgcaggagctgtccttctacctgcaaattaacgtg
cccgccaaggtgctgctgctgaaggagaacagcaacaccagcagcggggagcagacagtc
acgtgcgccacagaagggatgcccgagccggagctgagctggttcacctgcagcgacatc
aaagggtgcggcagccaggagcagcctaccaggctgctggggaacagctcggaggagatc
aacctgcagaccggcaccgtgtaccacgaggcgctgaaggtttaccaggtgaacagcagt
ctgcggctccgcagcatggacgagcgccggctcatccgatgctctgtgcagaacctcctg
ggtagtgattatcaggacatcaccctagccccacacgcctttccctttaaggtggtcctc
atctccggcatcctggccttggtggtgctggccgtcgtcttcctggcgatcctcgtcatc
gtgtggaagaaggtcaggaagcctcgctatgaaatccgctggaaggtgattgagtcggtc
agctccgatggacacgagtacatctacgtggatcccatgcagctcccctacgactgcagc
tgggagctctccagggacaagctggtgctaggtcgcactctcggatccggagcctttggc
cgagtggtggaggcaacggcccatggcctgagccactcgcaatccgtgatgagagtggcc
gtgaaaatgctcaagtctaccgccaggagcagtgagaagcaggccctgatgtctgagctg
aagatcatgagccacttgggacctcacctaaacattgtcaacttgctgggagcctgcacc
aaaggaggccccatctatatcataacggagtattgtcgctatggagacctagtggactac
ctgctccggaacaagcacaccttcctgcagtactacaccgagaaggcgaggcgagagatg
gaggtgtacgggaacgtttccgaagaggagaaggtgtacagcctcgcctttgctgtggaa
agcgacggcggctacatggatatgagcaaggacgaatccctggactatgttcccatgtct
gatatgaagggagagctcaagtatgctgacatagacccctccaattacggcaccccctac
gagctggacagctattccccctcagctcctgaccagacggaccgtgtgaccctgataaac
gagtccccgctcctcagctacacagacctggttgggtttagtttccaggtggccaatggg
atggaattcctcgcgtccaaaaactgcgtgcaccgagacctggccgcgaggaacgtcctc
atctgcgaggggaagctggtgaagatctgtgacttcgggctggccagagacatcatgagg
gattccaactacatctccaaaggcagcaccttcctgcctctgaagtggatggcacccgag
agcatcttcaacaacctctacacgaccctgagtgatgtgtggtcctttgggatcctcctc
tgggagatattcactctgggtgggactccataccccgaactacccatgaacgaacagttc
tacaacgccatcaaacgtggctaccgcatgtctaagcccacccatgcttccaacgagatc
tacgacatcatgcagaaatgttgggaagagaagtttgagataagaccgtccttctctcag
ctggtggtactgatggggaacctcctggcagatacatacaagaagcggtaccagcaggtc
gaggaagaattcctgaagagcgaccacccagctgttctacgcaccaggcccaggatccca
ggggtcagcagtgccgagttcccccccagccccggaagtgtcctctattccgctgtgcag
caggatgggggggacaacgattacatcatcccccttcctgatcccaagccagatggaatc
gacgacggccctcaggaagcttccatcagccgggccagttctatgctaaacgaagcaaac
acggcgtccaccatatcctgcgacagccccctggacccgcagcaggaagaggaacaagca
ccagaaccgaagtcaggctgccaggagccaaacccagagcaccacactatggaagagagt
tttctgtag
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