Pelodiscus sinensis (Chinese soft-shelled turtle): 102461304
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Entry
102461304 CDS
T02980
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04620
Toll-like receptor signaling pathway
pss04621
NOD-like receptor signaling pathway
pss04622
RIG-I-like receptor signaling pathway
pss05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
102461304 (TRAF3)
04621 NOD-like receptor signaling pathway
102461304 (TRAF3)
04622 RIG-I-like receptor signaling pathway
102461304 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102461304 (TRAF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
CCDC18_1st
Cast
zf-C3HC4
ATG16
Sina_ZnF
CEP104_ZnF
Med28
zf-C3HC4_2
Rod_CreS
Astrin_C
Tropomyosin
ADIP
MPS2
ODF2_N
CCDC18_2nd
CEP135_TSGA10_CC
NOCA1_mid
SNARE
zf-RING_6
SPATA24
zf-RING_UBOX
T4SS_LegC2C7
DUF1664
Spc29
HrpB7
Mua
THOC7
Csm2_III-A
T3SSipB
KxDL
DUF3450
FliJ
Motif
Other DBs
NCBI-GeneID:
102461304
NCBI-ProteinID:
XP_075782635
Ensembl:
ENSPSIG00000015342
UniProt:
K7GAC6
LinkDB
All DBs
Position
4:complement(21501405..21600136)
Genome browser
AA seq
566 aa
AA seq
DB search
MDTSKKTEPPVSVEMLQQRANPDHVPGSIYIPKQGGYTEKFVNTVEDKYKCEKCHLILCN
PKQTECGHRFCETCINALLSSPNPKCTACQEHIVKDKVFKDNCCRRELLALQIYCRNESK
GCNELLTLAQLLIHLRNDCQFEELSCPRADCKEKILRKDLPDHIEKTCNYRETTCKYCKN
QVPMITLQKHEDTDCPCVVVSCPHKCSVTSLLRSELNAHLSECINAPSTCSFKRYGCTFQ
GTNQQIKAHEASSAVQHVNLLKEWSNSLENKVAMLQNESLEKNKSIQTLHNQICSFEIEI
ERQKEMLRNNESKIHHLQRVIDNQAEKLKELDKEIRPFRQNWEEADIMKSSVESLQNRVS
ELESVDKTGGQGARNTAILETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKI
RDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEY
DALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTV
LENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagtaaaaagacagaaccccctgtgtctgtggaaatgttgcaacaaagagca
aaccctgatcacgttcctggatcaatttatattccaaaacaaggtggttacacagagaaa
tttgtaaacacagtggaggacaagtataaatgtgaaaaatgtcatctcatattgtgcaat
cctaaacagacggaatgtggacacagattctgtgagacctgcattaatgcattgttaagt
tcacctaacccaaaatgtacagcgtgtcaagagcacatagttaaagataaggtatttaag
gataactgctgtaggagagagcttcttgcccttcagatttactgcagaaatgaaagcaaa
ggctgcaatgaactgctgacactggcacaattactgatacatttgagaaatgactgtcag
tttgaagaactttcatgccctcgtgctgattgcaaagaaaaaatcctgcggaaagacttg
ccagaccacatagaaaagacctgtaactatcgggagactacatgtaaatactgtaaaaac
caagtcccaatgattacattacagaaacatgaagatacagactgtccctgtgtcgtggtt
tcatgtcctcataaatgcagtgttacatcactcttgaggagtgagttgaatgcacatttg
tcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcacttttcag
ggaacaaatcagcaaattaaagcacatgaagccagctcagcagtgcagcatgttaactta
ttgaaagagtggagtaattctctagagaataaggtggccatgctccagaatgaaagtttg
gaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaaatt
gaaagacagaaggaaatgctgcggaataatgaatctaaaatacatcatttacagcgagta
atagataatcaagcagagaaattgaaagagctggacaaagagatccgccccttccgacag
aattgggaggaggcagatatcatgaagagcagtgtggagtccctgcagaatagagtgagt
gagctggaaagtgttgataaaactggaggacaaggagctcgaaatacagccatactagag
acacagctaagtagacacgatcaaatgctcagtgttcatgatattcggctggctgacatg
gacctccgattccaggtgttagaaactgccagttacaatggtgtattaatttggaaaatt
cgagattataaacgtcggaaacaagaggccgtcatggggaaaactctgtcattgtacagc
cagcccttttatactggatactttggctataagatgtgtgccagagtttaccttaatgga
gatggcatgggaaaagggacgcacttgtcattgtttttcgtcataatgcgtggagaatat
gatgccttacttccctggccatttaaacagaaagtgactctgatgctaatggatcaggga
ccttcgcggcgtcacttaggcgatgctttcaaaccagatccaaacagcagtagtttcaag
aagcctactggagaaatgaacattgcatctggctgcccagtctttgtggctcaaacagtt
ctagaaaatggaacgtatattaaagatgatactatttttattaaagtcatagtggataca
tcggatctaccggacccctga
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