Pseudomonas sp. SXM-1: DCC84_19195
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Entry
DCC84_19195 CDS
T11095
Symbol
mdeB
Name
(GenBank) alpha-ketoglutarate dehydrogenase
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
pssx Pseudomonas sp. SXM-1
Pathway
pssx00010
Glycolysis / Gluconeogenesis
pssx00020
Citrate cycle (TCA cycle)
pssx00620
Pyruvate metabolism
pssx00785
Lipoic acid metabolism
pssx01100
Metabolic pathways
pssx01110
Biosynthesis of secondary metabolites
pssx01120
Microbial metabolism in diverse environments
pssx01200
Carbon metabolism
pssx01210
2-Oxocarboxylic acid metabolism
Module
pssx_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
DCC84_19195 (mdeB)
00020 Citrate cycle (TCA cycle)
DCC84_19195 (mdeB)
00620 Pyruvate metabolism
DCC84_19195 (mdeB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DCC84_19195 (mdeB)
Enzymes [BR:
pssx01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
DCC84_19195 (mdeB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDH_E1_M
Transketolase_C_1
Transketolase_N
PDH_E1_N
Transketolase_C
Motif
Other DBs
NCBI-ProteinID:
QBQ11732
LinkDB
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Position
complement(4042953..4045631)
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AA seq
892 aa
AA seq
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MNGFASAVSQTAMDQEELAEWRDALASLVANAGAARAREILDMLADAGGAPHIAWKPRHG
TPYINSIAVEQQPPFPGDLATEERLASVVRWNALAMVVRANQAYGELGGHIASYASAADL
FEVGFNHFFRARNDSFGGDLVFYQPHSAPGIYARAFLEGRLSEADLAHYRQEIGAGKAGA
RGLSSYPHPWLMPDFWQFPTGSMGIGPISSIFQARFMRYLQHRGLQDTTDRHVWGVFGDG
EMDEPESMSALTLAAREGLDNLTWVVNCNLQRLDGPVRGNGRIIDELEALFAGAGWNVIK
LVWGSDWDALLAKDTDGELARTLSQTVDGQFQTFAAKDGAYNREHFFGQSEALSKLVEGL
SDEQIDRLKRGGHDMVKIHAAYHAARRVAGKPTVILAQTKKGFGMGEAGQGKMTTHQQKK
LDREALIAFRNRFQLPLSDEQAESLSFYKPAEDSLEMRYLHQRRATLGGYVPSRGQQAPT
VSVPPVSGYGAFATQAEGKEMSTTMAFVRMLTNLLKDKALGPRIVPIVADEARTFGMANL
FKQIGIYSSVGQRYEPEDIGSILSYREATDGQILEEGISEASAISSWVAAATSYSVHGLR
MLPFYIYYSMFGFQRVGDLIWAAADQRARGFLLGATAGRTTLGGEGLQHQDGSSHLMAAT
VPNCRAYDPAFAGEFAVILDHGMRQMLEHDVDEFYYVTLMNENYPQPSLPEGVEAAIIKG
MYRLSGQPGGMVRLLGSGTLVREAQAAAQLLAEDWQVDAEVFSVTSFSELARDARDVERW
NRLHPQQPARRSHLAECLPKGAPVVAVSDYVRAVPQMLGSYVDSAYTVLGTDGFGRSDTR
AALRDFFEVDRHHIVLAALTALVEQGSLDRQVCQQAIERYGVQTDREPSWTS
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtttcgcgagtgcagtgagtcagacagcgatggaccaggaagaactggccgaa
tggcgcgatgccctggcctccctggtggccaacgccggcgcggcgcgcgcacgggagatc
ctcgacatgctggcggatgccggcggcgcgccgcacatcgcctggaaaccccggcatggc
acgccctacatcaatagcatcgccgtggagcagcaaccgccgtttcccggcgacctggcc
accgaagaacgcttggcctcagtggtgcgctggaacgccctggccatggtagtgcgcgcc
aaccaggcctatggcgaactgggcgggcatatcgccagctacgccagcgcggcggatttg
ttcgaggtgggcttcaaccactttttccgtgcccgcaacgacagttttggcggcgacctg
gtgttctaccagccgcattccgcccccggcatctatgctcgcgccttccttgaagggcgc
ctgagcgaggccgacctggcccactatcgccaggaaatcggtgccggcaaggcgggcgcc
cgaggtttgtccagctatccccatccgtggttgatgccggacttctggcaatttcccacc
gggtccatgggcattggccccatcagctcgattttccaggcgcggttcatgcgctacctg
caacaccgcggcttgcaggacaccaccgaccgccacgtatggggcgtattcggcgacggc
gagatggacgaaccggaaagcatgtcggccctgaccctggccgcccgtgaaggcctggac
aacctgacctgggtggtcaactgcaacctgcaacggctcgacggcccggtgcgtggcaac
gggcgaattatcgacgagctggaggcgttgttcgccggtgccggctggaacgtgatcaag
ctggtctggggctcggactgggacgccttgctggccaaggacaccgacggcgagctggcg
cgcaccctgtcgcagacggtggatggacaattccagaccttcgccgccaaggacggcgcc
tacaaccgcgaacatttcttcggccagagcgaggcgctgtccaaactggtcgagggcctg
agcgacgagcagatcgaccggctcaagcgtggcggccatgacatggtcaagatccacgcg
gcctatcacgcggcgcgccgggtcgccggcaaacccacggtgatcctggcccagaccaaa
aagggctttggcatgggcgaggccgggcagggcaagatgaccacccaccagcagaagaag
ctcgaccgcgaggccttgatcgccttccgcaatcgcttccagttgccgctgtcggatgaa
caggccgaatccctgagcttctacaaaccggctgaagacagcctcgaaatgcgttacctg
caccagcgccgcgccaccctcggcgggtatgtgccgagccgtggccagcaggcgcccacc
gtgagtgtcccgccggtgtcgggctacggcgcgtttgccacccaggcggagggcaaggaa
atgtccaccaccatggcctttgtgcgcatgctcaccaatctgctcaaggacaaggccctc
ggcccgcgcatcgtgcccatcgtcgccgatgaggcgcgcaccttcggcatggccaacctg
ttcaagcagatcggcatctattccagcgtcggccagcgctacgagcccgaagacatcggc
tcgatcctcagctaccgcgaagccaccgacgggcagatccttgaagaaggcatcagcgaa
gccagcgccatcagttcctgggtcgcggcggccaccagttattcggtgcatggcctgcgg
atgctgccgttttacatctactactcgatgttcggtttccagcgcgtgggtgacctgatc
tgggccgccgccgaccagcgtgcccgaggttttctgctgggcgccactgccgggcgcacc
accctgggtggcgaaggcttgcagcaccaggacggcagcagccacctgatggccgccacc
gtgcccaattgccgtgcctacgacccggcgtttgccggcgagtttgcggtgatcctcgac
catggcatgcgccagatgctggagcacgatgtggacgagttctactacgtgaccctgatg
aacgaaaactacccgcagccgagcctgccggaaggcgtcgaagcggcgatcatcaaaggc
atgtaccgtctgagcgggcagcctggcggcatggtccggttgctcggctccggcacgctg
gtgcgcgaagcccaggcagcggcgcaattgttggcggaggattggcaggttgacgctgaa
gtgttcagtgtcaccagcttcagcgaactggcccgggacgcccgtgacgtggaacgctgg
aaccgcctgcatccgcaacagccggcgcggcgcagccacctggcggagtgtttgcccaag
ggcgcgccggtggtggcggtatctgactatgtaagggcggtgccgcagatgcttgggtcg
tacgtggattcggcttacaccgtgctggggacggatggctttggtcgcagcgatacccgg
gcggcgttgcgggatttcttcgaggtggaccgccatcacatcgtgctggcggcgctgacg
gcgttggtggagcaggggagtctggacaggcaggtttgccagcaggcgatagagcgttat
ggggtgcagaccgatcgcgagccgtcctggacctcctga
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