Pseudomonas sp. 31-12: DJ564_07595
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Entry
DJ564_07595 CDS
T11624
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pssz Pseudomonas sp. 31-12
Pathway
pssz01501
beta-Lactam resistance
pssz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pssz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DJ564_07595
01503 Cationic antimicrobial peptide (CAMP) resistance
DJ564_07595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pssz03036
]
DJ564_07595
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pssz02000
]
DJ564_07595
01504 Antimicrobial resistance genes [BR:
pssz01504
]
DJ564_07595
Chromosome and associated proteins [BR:
pssz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
DJ564_07595
Transporters [BR:
pssz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
DJ564_07595
Antimicrobial resistance genes [BR:
pssz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DJ564_07595
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
HH_YBHG
Beta-barrel_RND_2
HH_EMRA
BSH_CusB
BSH_CzcB
YknX_C
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
AWM90697
LinkDB
All DBs
Position
complement(1652554..1653711)
Genome browser
AA seq
385 aa
AA seq
DB search
MQFKPAVTALVAAVALASLLSGCKKEEAAPAAPPPQVGVVTLQPQAFTLTSELPGRTSAF
RIAEVRPQVNGIILKRLFKEGGDVKAGQQLYQIDPAVYEATLKSAEANLQQTKSISDRYK
QLVNEQAVSRQEYDTALANRLQSEASLQSAQINVRYTKVYAPISGRIGRSNVTEGALVSN
GQADAMAVIQQLDPIYVDVTQSSVELLELRRELESGRLQKAGDTAAAVKLTLEDGSEYKQ
EGKLEFSEVSVDQTTGSVTLRAVFPNPDHTLLPGMFVHAQLKSGVNAAAILAPQQGVTRD
LKGTPTALVVGADNKVELRQLKASRTVGSQWLIEDGLKAGDRLITEGLQFVKPGIEVKAS
EATNVGAKNPAPAQAADKASSGKGE
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcaagccagctgttaccgctctggtcgccgccgtcgccctcgcatcactgctc
agcggatgcaaaaaggaagaagcggcacccgccgcaccgcctcctcaggtcggcgtggtt
accctgcaacctcaagcctttaccctgacgtccgagcttccggggcgcaccagtgcgttc
cgcattgccgaagttcgcccacaggtcaacggcatcattctcaagcgtctgttcaaggaa
ggcggcgacgtcaaggccggtcagcagctgtatcagatcgatccggccgtttatgaagca
acgctgaaaagcgccgaagccaaccttcaacagaccaagtcgatctccgaccgctataag
cagctggtcaacgagcaggccgtcagccgtcaggaatacgacacggcgctggccaatcgt
ttgcaatcggaagcctccctgcaatccgctcagatcaacgtgcgttacaccaaggtctac
gcaccgatctccggtcgcatcggccgctcgaacgtgaccgagggcgcgctggtcagcaac
ggccaggccgacgccatggcggtgatccagcaactcgacccgatttacgtcgacgtcacc
cagtcgtccgtcgagctgcttgagctgcgtcgcgaactggaaagcggtcgcctgcaaaag
gctggcgacacggccgcggcagtcaagctgaccctcgaagacggcagcgagtacaagcag
gaaggcaagctcgaattctccgaagtctcggttgatcaaaccaccggctccgtgaccttg
cgtgcagtgttcccgaacccggatcacacgctgcttccgggcatgttcgtgcacgcccag
ctcaaatccggcgtgaacgccgccgcgattctggcgccgcaacaaggcgtgacccgcgac
ctcaaaggcacaccgaccgcactggtcgtgggcgctgacaacaaggtcgaactgcgtcag
ctcaaggccagccgcaccgtcggcagccaatggctgatcgaagacggtctgaaagccggc
gatcgcctgatcaccgaaggactgcaattcgtcaaacctggcatcgaagtcaaagccagt
gaagcgactaacgttggcgcaaagaacccggcccccgcacaggcagctgacaaggcttcc
agcggcaaaggggagtaa
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